RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 MSRB1Q9NZV6 116 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 ARL2-SNX15V9GYD0 113 aa5.59□□□□□ -1.51
GINS3-204ENST00000561952 A0A087WTM6 91 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 PGPEP1LA6NFU8 196 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 M0R036 132 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 RS1O15537 224 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 PSCAO43653 123 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 SCO1O75880 301 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 SNAPINO95295 136 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 GHRHP01286 108 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 IGLV2-11P01706 119 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 IGHV3-30P01768 117 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 IGHV3-33P01772 117 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 IGHV3-30-5P0DP03 117 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 RNASE3P12724 160 aaKnown RBP5.58□□□□□ -1.52
GINS3-204ENST00000561952 S100A4P26447 101 aaKnown RBP5.58□□□□□ -1.52
GINS3-204ENST00000561952 TAGLN2P37802 199 aaKnown RBP5.58□□□□□ -1.52
GINS3-204ENST00000561952 ATRAIDQ6UW56 229 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 SUN5Q8TC36 379 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 C9orf85Q96MD7 179 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 PRADC1Q9BSG0 188 aa5.58□□□□□ -1.52
GINS3-204ENST00000561952 NKX6-2Q9C056 277 aaPredicted RBP5.58□□□□□ -1.52
GINS3-204ENST00000561952 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
GINS3-204ENST00000561952 FAT1Q14517 4588 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 IGHV3-38A0A0C4DH36 116 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 A0A1B0GV50 99 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 GAGE12JA6NER3 117 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 H3BVH4 76 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 PEX7O00628 323 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 SRP19P09132 144 aaKnown RBP5.57□□□□□ -1.52
GINS3-204ENST00000561952 HAMPP81172 84 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 GAGE1Q13065 139 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 GAGE4Q13068 117 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 GAGE5Q13069 117 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 RHOHQ15669 191 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 GAGE13Q4V321 117 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 Q86TA4 180 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 Q8N1X5 172 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 JPT2Q9H910 190 aa5.57□□□□□ -1.52
GINS3-204ENST00000561952 TRAV8-6A0A0B4J262 113 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 IGKV3D-20A0A0C4DH25 116 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 A0A1W2PRE2 83 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 GRIFINA4D1Z8 144 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 FAM74A7A6NL05 159 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 IFNA1P01562 189 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 BCL2P10415 239 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 ASIPP42127 132 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 SAPCD1Q5SSQ6 148 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 Q6ZSN1 163 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 C10orf126Q8N4M7 172 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 CLRN3Q8NCR9 226 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 ZC2HC1AQ96GY0 325 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 MANBALQ9NQG1 85 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 VAX2Q9UIW0 290 aa5.56□□□□□ -1.52
GINS3-204ENST00000561952 TRBV6-4A0A1B0GX49 114 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 B4DEV8 164 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 TMEM250H0YL14 139 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 SH2D1AO60880 128 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 UBE2G1P62253 170 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 FAM74A4Q5TZK3 123 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 CST9LP1Q5W188 147 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 SH2D6Q7Z4S9 175 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 ATP6V0E2Q8NHE4 81 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 SAMD10Q9BYL1 202 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 PARLQ9H300 379 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 GNG13Q9P2W3 67 aa5.55□□□□□ -1.52
GINS3-204ENST00000561952 FABP5P3A8MUU1 101 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 MGST1P10620 155 aaKnown RBP5.54□□□□□ -1.52
GINS3-204ENST00000561952 AKR1C3P42330 323 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 RHEBQ15382 184 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 LINC01556Q5JQF7 62 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 LELP1Q5T871 98 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 C14orf178Q8N769 122 aaPredicted RBP5.54□□□□□ -1.52
GINS3-204ENST00000561952 GTSF1LQ9H1H1 148 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 Q9UF83 564 aa5.54□□□□□ -1.52
GINS3-204ENST00000561952 A0A087WWL8 130 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 IGLV5-52A0A0A0MRZ9 124 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 A8MWV9 139 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 EPM2AB3EWF7 344 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 M0R381 172 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 LECT2O14960 151 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 SMR3BP02814 79 aaPredicted RBP5.53□□□□□ -1.52
GINS3-204ENST00000561952 ARMS2P0C7Q2 107 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 GCSHP23434 173 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 CRIP1P50238 77 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 MEF2BQ02080 365 aaPredicted RBP5.53□□□□□ -1.52
GINS3-204ENST00000561952 FAM74A3Q4VXF1 159 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 FAM162BQ5T6X4 162 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 CDPF1Q6NVV7 123 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 HIST1H2BAQ96A08 127 aa5.53□□□□□ -1.52
GINS3-204ENST00000561952 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
GINS3-204ENST00000561952 A0A087WWC5 75 aa5.52□□□□□ -1.53
GINS3-204ENST00000561952 C7orf77A4D0Y5 90 aa5.52□□□□□ -1.53
GINS3-204ENST00000561952 IBA57-AS1B1ANH7 110 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms