RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 TMUB2Q71RG4 321 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
SPG7-205ENST00000561945 hCG_2014768A0A024R1R8 64 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 J3QL48 77 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 RHODO00212 210 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 SEC11BP0C7V7 166 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 ATRAIDQ6UW56 229 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 NIT1Q86X76 327 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 C14orf178Q8N769 122 aaPredicted RBP9.55□□□□□ -0.88
SPG7-205ENST00000561945 STOML3Q8TAV4 291 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 JPT2Q9H910 190 aa9.55□□□□□ -0.88
SPG7-205ENST00000561945 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 KRBOX1C9JBD0 128 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 S100A4P26447 101 aaKnown RBP9.54□□□□□ -0.88
SPG7-205ENST00000561945 CRIP1P50238 77 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 ZNF726P1Q15940 193 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
SPG7-205ENST00000561945 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 Q86TA4 180 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 Q8N976 141 aa9.54□□□□□ -0.88
SPG7-205ENST00000561945 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
SPG7-205ENST00000561945 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 LECT2O14960 151 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 TPT1P13693 172 aaKnown RBP9.53□□□□□ -0.88
SPG7-205ENST00000561945 EIF5AL1Q6IS14 154 aaKnown RBP9.53□□□□□ -0.88
SPG7-205ENST00000561945 SCXQ7RTU7 201 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 HIST1H2BAQ96A08 127 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 RMI2Q96E14 147 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 SFRP2Q96HF1 295 aa9.53□□□□□ -0.88
SPG7-205ENST00000561945 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 FAM74A7A6NL05 159 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 B4DEV8 164 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 H3BVH4 76 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 PEX7O00628 323 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 ZC2HC1AQ96GY0 325 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 ZFP30Q9Y2G7 519 aa9.52□□□□□ -0.89
SPG7-205ENST00000561945 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.51□□□□□ -0.89
SPG7-205ENST00000561945 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
SPG7-205ENST00000561945 MAP1LC3B2A6NCE7 125 aa9.51□□□□□ -0.89
SPG7-205ENST00000561945 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
SPG7-205ENST00000561945 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
SPG7-205ENST00000561945 CHAC1Q9BUX1 264 aa9.51□□□□□ -0.89
SPG7-205ENST00000561945 MAP1LC3BQ9GZQ8 125 aa9.51□□□□□ -0.89
SPG7-205ENST00000561945 IFNA7P01567 189 aa9.5□□□□□ -0.89
SPG7-205ENST00000561945 ZNF674Q2M3X9 581 aa9.5□□□□□ -0.89
SPG7-205ENST00000561945 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
SPG7-205ENST00000561945 FAM213BQ8TBF2 198 aa9.5□□□□□ -0.89
SPG7-205ENST00000561945 TCEAL7Q9BRU2 100 aa9.5□□□□□ -0.89
SPG7-205ENST00000561945 URGCP-MRPS24S4R325 110 aa9.5□□□□□ -0.89
SPG7-205ENST00000561945 SH2D1AO60880 128 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 UBE2D3P61077 147 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 UBE2D2P62837 147 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 ELOBQ15370 118 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 LINC01620Q4KN68 170 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 OR10G8Q8NGN5 311 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 MBD3L1Q8WWY6 194 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 FMC1Q96HJ9 113 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 KLK12Q9UKR0 248 aa9.49□□□□□ -0.89
SPG7-205ENST00000561945 IGKV2D-24A0A075B6R9 120 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 LTAP01374 205 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 RAB5CP51148 216 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 UBE2G2P60604 165 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 Q0VG73 95 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 SLC51BQ86UW2 128 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 CIRBP-AS1Q8TBR5 109 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
SPG7-205ENST00000561945 TRBV7-3A0A075B6L6 115 aa9.47□□□□□ -0.89
SPG7-205ENST00000561945 OXTP01178 125 aa9.47□□□□□ -0.89
SPG7-205ENST00000561945 IGLV2-8P01709 118 aa9.47□□□□□ -0.89
SPG7-205ENST00000561945 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
SPG7-205ENST00000561945 FHITP49789 147 aa9.47□□□□□ -0.89
SPG7-205ENST00000561945 FAM74A4Q5TZK3 123 aa9.47□□□□□ -0.89
SPG7-205ENST00000561945 A0A087WWL8 130 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 A0A087WX48 190 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 M0R036 132 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
SPG7-205ENST00000561945 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 CST9LP1Q5W188 147 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 PRR27Q6MZM9 219 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 ZFP82Q8N141 532 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
SPG7-205ENST00000561945 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
SPG7-205ENST00000561945 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
SPG7-205ENST00000561945 CXCL1P09341 107 aa9.45□□□□□ -0.9
SPG7-205ENST00000561945 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
SPG7-205ENST00000561945 M0R381 172 aa9.44□□□□□ -0.9
SPG7-205ENST00000561945 RAB4BP61018 213 aa9.44□□□□□ -0.9
SPG7-205ENST00000561945 UBE2G1P62253 170 aa9.44□□□□□ -0.9
SPG7-205ENST00000561945 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms