RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 UBR5O95071 2799 aaPredicted RBP5.54□□□□□ -1.52
CDH1-203ENST00000561751 TEX15Q9BXT5 2789 aa5.54□□□□□ -1.52
CDH1-203ENST00000561751 LRRK2Q5S007 2527 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 MGAQ8IWI9 3026 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 IGHV5-10-1A0A0J9YXX1 117 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 A0A1W2PNU3 283 aaPredicted RBP5.53□□□□□ -1.52
CDH1-203ENST00000561751 I3L2K1 104 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 J3QQQ9 107 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 IGKV3-15P01624 115 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 IGHV3-9P01782 118 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
CDH1-203ENST00000561751 RPL27AP46776 148 aaKnown RBP5.53□□□□□ -1.52
CDH1-203ENST00000561751 LYZP61626 148 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
CDH1-203ENST00000561751 C3orf36Q3SXR2 165 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 C2orf66Q6UXQ4 117 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 PRIMA1Q86XR5 153 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 ZNF491Q8N8L2 437 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 HCFC1P51610 2035 aa5.53□□□□□ -1.52
CDH1-203ENST00000561751 USF3Q68DE3 2245 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 ATMQ13315 3056 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 IGLV4-69A0A075B6H9 119 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 A0A087WW49 117 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 E7EUB6 86 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 TIMM8AO60220 97 aaPredicted RBP5.52□□□□□ -1.53
CDH1-203ENST00000561751 TIMM17BO60830 172 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 IGKV1-17P01599 117 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 IGHV1-69P01742 117 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 RFPL3SP0C7P2 107 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 ZNF415Q09FC8 603 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 RNF125Q96EQ8 232 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 UPK3BQ9BT76 320 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 ICOSQ9Y6W8 199 aa5.52□□□□□ -1.53
CDH1-203ENST00000561751 SPTAN1Q13813 2472 aaKnown RBP5.52□□□□□ -1.53
CDH1-203ENST00000561751 NOTCH2Q04721 2471 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 FLNCQ14315 2725 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 IGIPA6NJ69 53 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 TRIAP1O43715 76 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 CCL4P13236 92 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 DLX1P56177 255 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 MRGPRG-AS1Q2M3A8 158 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 ZNF876PQ49A33 203 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 TMEM200BQ69YZ2 307 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 JPT2Q9H910 190 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 MSRB1Q9NZV6 116 aa5.51□□□□□ -1.53
CDH1-203ENST00000561751 TRAV12-2A0A075B6T6 113 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 IGLV1-44P01699 117 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
CDH1-203ENST00000561751 Q1RN00 199 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 Q6JHZ5 121 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 DUX4L9Q6RFH8 374 aaPredicted RBP5.5□□□□□ -1.53
CDH1-203ENST00000561751 MUSTN1Q8IVN3 82 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 DPH3P1Q9H4G8 78 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
CDH1-203ENST00000561751 TLN1Q9Y490 2541 aaKnown RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 ANKRD17O75179 2603 aaKnown RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 AGRNO00468 2067 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 TRBV7-1A0A0A6YYK4 115 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 IGHV7-4-1A0A0J9YVY3 117 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 TINCRA0A1B0GVN0 87 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 MBD3L4A6NDZ8 208 aaPredicted RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 MBD3L3A6NE82 208 aaPredicted RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 MBD3L5A6NJ08 208 aaPredicted RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 H3BTX0 84 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 RS1O15537 224 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 BUB3O43684 328 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 GAS8-AS1O95177 125 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 IGHV4-39P01824 125 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 FOLR3P41439 243 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 ZNF80P51504 273 aaPredicted RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 Q6ZT83 130 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 ZNRF1Q8ND25 227 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 PIMREGQ9BSJ6 248 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 TIMM21Q9BVV7 248 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 RNF7Q9UBF6 113 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
CDH1-203ENST00000561751 TEP1Q99973 2627 aaKnown RBP5.49□□□□□ -1.53
CDH1-203ENST00000561751 TEX22C9J3V5 150 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 LY6LH3BQJ8 138 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 J3QLI3 93 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 M0R3E3 92 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 VCYO14598 125 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 GATA1P15976 413 aaPredicted RBP5.48□□□□□ -1.53
CDH1-203ENST00000561751 KLRB1Q12918 225 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 CEMP1Q6PRD7 247 aaPredicted RBP5.48□□□□□ -1.53
CDH1-203ENST00000561751 CXorf67Q86X51 503 aaPredicted RBP5.48□□□□□ -1.53
CDH1-203ENST00000561751 C17orf77Q96MU5 243 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 GAFA1Q96PS6 74 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 OVOL2Q9BRP0 275 aa5.48□□□□□ -1.53
CDH1-203ENST00000561751 USP9YO00507 2555 aaPredicted RBP5.47□□□□□ -1.53
CDH1-203ENST00000561751 IGKV3D-20A0A0C4DH25 116 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 hADV29S1A0JD25 119 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 NBR2O15453 112 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 SEC61GP60059 68 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms