RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 FAM162BQ5T6X4 162 aa8.19□□□□□ -1.1
IRF9-213ENST00000561342 Q6AWC8 147 aa8.19□□□□□ -1.1
IRF9-213ENST00000561342 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
IRF9-213ENST00000561342 RASL11AQ6T310 242 aa8.19□□□□□ -1.1
IRF9-213ENST00000561342 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
IRF9-213ENST00000561342 MRPS16Q9Y3D3 137 aaKnown RBP8.19□□□□□ -1.1
IRF9-213ENST00000561342 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 MT-ND6P03923 174 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 S100A6P06703 90 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 RPS20P60866 119 aaKnown RBP8.18□□□□□ -1.1
IRF9-213ENST00000561342 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 Q6ZSN1 163 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 ATP5L2Q7Z4Y8 100 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 ZC2HC1AQ96GY0 325 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 LINC00477Q96M19 166 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 LINC00467Q9BRT7 94 aa8.18□□□□□ -1.1
IRF9-213ENST00000561342 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 PRAC2D3DTV9 90 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 GAGE7O76087 117 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 OR2D3Q8NGH3 330 aa8.17□□□□□ -1.1
IRF9-213ENST00000561342 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 A0A0J9YY99 117 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 S100A8P05109 93 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 HOXA5P20719 270 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 BORCS7Q96B45 105 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 VGLL1Q99990 258 aa8.16□□□□□ -1.1
IRF9-213ENST00000561342 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 C7orf71A4D174 169 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.1
IRF9-213ENST00000561342 KLLNB2CW77 178 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 SH2D1AO60880 128 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
IRF9-213ENST00000561342 TRGC2P03986 189 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 TCL1AP56279 114 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 ESRGQ1W209 222 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 Q8TAT8 98 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 GNB1LQ9BYB4 327 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
IRF9-213ENST00000561342 A0A1B0GW15 77 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 FABP5P3A8MUU1 101 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 HLA-DQA1P01909 254 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 ERCC8Q13216 396 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 SLAQ13239 276 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 Q6ZTI0 123 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 ZFP82Q8N141 532 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 KRTAP1-5Q9BYS1 174 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
IRF9-213ENST00000561342 J3KRW8 73 aa8.13□□□□□ -1.11
IRF9-213ENST00000561342 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
IRF9-213ENST00000561342 PRB4P10163 310 aaPredicted RBP8.13□□□□□ -1.11
IRF9-213ENST00000561342 CRISP2P16562 243 aa8.13□□□□□ -1.11
IRF9-213ENST00000561342 C11orf72Q8NBR9 251 aa8.13□□□□□ -1.11
IRF9-213ENST00000561342 NUP35Q8NFH5 326 aa8.13□□□□□ -1.11
IRF9-213ENST00000561342 FAM19A4Q96LR4 140 aa8.13□□□□□ -1.11
IRF9-213ENST00000561342 FAT1Q14517 4588 aa8.13□□□□□ -1.11
IRF9-213ENST00000561342 VPS13BQ7Z7G8 4022 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 A0A096LPF7 62 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 TRGV1A0A0A0MS02 117 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 SPINK4O60575 86 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 FOXA3P55318 350 aaPredicted RBP8.12□□□□□ -1.11
IRF9-213ENST00000561342 HBBP68871 147 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 RIGQ13278 110 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 VSIG2Q96IQ7 327 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 GSN-AS1Q9NRJ2 163 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 ICOSQ9Y6W8 199 aa8.12□□□□□ -1.11
IRF9-213ENST00000561342 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 LOC105371267A0A1B0GV96 52 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 K7EP13 123 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 EREGO14944 169 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 SIVA1O15304 175 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 GPX1P07203 203 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 CRIP1P50238 77 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 RAB4BP61018 213 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 FABP9Q0Z7S8 132 aa8.11□□□□□ -1.11
IRF9-213ENST00000561342 MRPL54Q6P161 138 aaKnown RBP8.11□□□□□ -1.11
IRF9-213ENST00000561342 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
IRF9-213ENST00000561342 A0A1B0GUT8 65 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 PHOX2AO14813 284 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 PAX4O43316 350 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST1H2BKO60814 126 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 ORM1P02763 201 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST1H2BJP06899 126 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST1H2BOP23527 126 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST1H2BBP33778 126 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 RNASE4P34096 147 aaKnown RBP8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST1H2BDP58876 126 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 LINC00315P59091 139 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST1H2BCP62807 126 aa8.1□□□□□ -1.11
IRF9-213ENST00000561342 HIST2H2BEQ16778 126 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms