RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 MAP1LC3BQ9GZQ8 125 aa17.89■□□□□ 0.45
SNRPA1-215ENST00000561187 UBE2G1P62253 170 aa17.88■□□□□ 0.45
SNRPA1-215ENST00000561187 HIST1H2BAQ96A08 127 aa17.88■□□□□ 0.45
SNRPA1-215ENST00000561187 RHODO00212 210 aa17.87■□□□□ 0.45
SNRPA1-215ENST00000561187 PIK3CD-AS1Q5SR53 167 aa17.87■□□□□ 0.45
SNRPA1-215ENST00000561187 FAM162BQ5T6X4 162 aa17.87■□□□□ 0.45
SNRPA1-215ENST00000561187 PHLDA3Q9Y5J5 127 aa17.87■□□□□ 0.45
SNRPA1-215ENST00000561187 URGCP-MRPS24S4R325 110 aa17.87■□□□□ 0.45
SNRPA1-215ENST00000561187 TOR2AQ5JU69 321 aa17.86■□□□□ 0.45
SNRPA1-215ENST00000561187 IGKV2D-24A0A075B6R9 120 aa17.85■□□□□ 0.45
SNRPA1-215ENST00000561187 A0A087WWC5 75 aa17.85■□□□□ 0.45
SNRPA1-215ENST00000561187 ARPC5O15511 151 aa17.85■□□□□ 0.45
SNRPA1-215ENST00000561187 TPT1P13693 172 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-215ENST00000561187 CST9LP1Q5W188 147 aa17.85■□□□□ 0.45
SNRPA1-215ENST00000561187 KLK12Q9UKR0 248 aa17.85■□□□□ 0.45
SNRPA1-215ENST00000561187 NIT1Q86X76 327 aa17.84■□□□□ 0.45
SNRPA1-215ENST00000561187 FMC1Q96HJ9 113 aa17.84■□□□□ 0.45
SNRPA1-215ENST00000561187 NKX6-2Q9C056 277 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-215ENST00000561187 BATF3Q9NR55 127 aa17.84■□□□□ 0.45
SNRPA1-215ENST00000561187 G3V3Q6 166 aa17.83■□□□□ 0.44
SNRPA1-215ENST00000561187 SFRP2Q96HF1 295 aa17.83■□□□□ 0.44
SNRPA1-215ENST00000561187 ZFP30Q9Y2G7 519 aa17.83■□□□□ 0.44
SNRPA1-215ENST00000561187 AKR1C3P42330 323 aa17.82■□□□□ 0.44
SNRPA1-215ENST00000561187 FHITP49789 147 aa17.82■□□□□ 0.44
SNRPA1-215ENST00000561187 DNLZQ5SXM8 178 aa17.82■□□□□ 0.44
SNRPA1-215ENST00000561187 LINC00528Q8N1L1 170 aa17.82■□□□□ 0.44
SNRPA1-215ENST00000561187 UBE2WQ96B02 151 aa17.82■□□□□ 0.44
SNRPA1-215ENST00000561187 A0A1B0GV50 99 aa17.81■□□□□ 0.44
SNRPA1-215ENST00000561187 SMLR1H3BR10 107 aa17.81■□□□□ 0.44
SNRPA1-215ENST00000561187 LINC01559Q495D7 138 aa17.81■□□□□ 0.44
SNRPA1-215ENST00000561187 CYTL1Q9NRR1 136 aa17.81■□□□□ 0.44
SNRPA1-215ENST00000561187 C1QBP02746 253 aa17.8■□□□□ 0.44
SNRPA1-215ENST00000561187 ZNF674Q2M3X9 581 aa17.8■□□□□ 0.44
SNRPA1-215ENST00000561187 Q6ZSA8 131 aa17.8■□□□□ 0.44
SNRPA1-215ENST00000561187 ZFP82Q8N141 532 aa17.8■□□□□ 0.44
SNRPA1-215ENST00000561187 RBFOX3A6NFN3 312 aa17.79■□□□□ 0.44
SNRPA1-215ENST00000561187 LTAP01374 205 aa17.79■□□□□ 0.44
SNRPA1-215ENST00000561187 RPL19P84098 196 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-215ENST00000561187 COX8CQ7Z4L0 72 aa17.79■□□□□ 0.44
SNRPA1-215ENST00000561187 STOML3Q8TAV4 291 aa17.79■□□□□ 0.44
SNRPA1-215ENST00000561187 RMI2Q96E14 147 aa17.79■□□□□ 0.44
SNRPA1-215ENST00000561187 A0A087WX48 190 aa17.78■□□□□ 0.44
SNRPA1-215ENST00000561187 J3QL48 77 aa17.78■□□□□ 0.44
SNRPA1-215ENST00000561187 PAGE4O60829 102 aa17.77■□□□□ 0.44
SNRPA1-215ENST00000561187 RPL36AP83881 106 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-215ENST00000561187 RPL36ALQ969Q0 106 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-215ENST00000561187 COX11Q9Y6N1 276 aa17.77■□□□□ 0.44
SNRPA1-215ENST00000561187 PLA2G1BP04054 148 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-215ENST00000561187 ZNF56Q15929 161 aa17.76■□□□□ 0.43
SNRPA1-215ENST00000561187 KCNIP4Q6PIL6 250 aa17.76■□□□□ 0.43
SNRPA1-215ENST00000561187 SCXQ7RTU7 201 aa17.76■□□□□ 0.43
SNRPA1-215ENST00000561187 MUC21A0A0G2JKD1 596 aa17.75■□□□□ 0.43
SNRPA1-215ENST00000561187 MUC21A0A140T8X8 626 aa17.75■□□□□ 0.43
SNRPA1-215ENST00000561187 UBE2D3P61077 147 aa17.75■□□□□ 0.43
SNRPA1-215ENST00000561187 UBE2D2P62837 147 aa17.75■□□□□ 0.43
SNRPA1-215ENST00000561187 OR10AG1Q8NH19 301 aa17.74■□□□□ 0.43
SNRPA1-215ENST00000561187 TRBV6-1A0A0K0K1D8 114 aa17.73■□□□□ 0.43
SNRPA1-215ENST00000561187 SCO2A0A1W2PP80 73 aa17.73■□□□□ 0.43
SNRPA1-215ENST00000561187 TMEM262E9PQX1 116 aa17.73■□□□□ 0.43
SNRPA1-215ENST00000561187 SSTP61278 116 aa17.73■□□□□ 0.43
SNRPA1-215ENST00000561187 FAM213BQ8TBF2 198 aa17.73■□□□□ 0.43
SNRPA1-215ENST00000561187 TRBV7-3A0A075B6L6 115 aa17.72■□□□□ 0.43
SNRPA1-215ENST00000561187 TRBV10-1A0A0K0K1A3 114 aa17.72■□□□□ 0.43
SNRPA1-215ENST00000561187 SEC11BP0C7V7 166 aa17.72■□□□□ 0.43
SNRPA1-215ENST00000561187 Q8N976 141 aa17.72■□□□□ 0.43
SNRPA1-215ENST00000561187 SFT2D1Q8WV19 159 aa17.71■□□□□ 0.43
SNRPA1-215ENST00000561187 TCEAL7Q9BRU2 100 aa17.71■□□□□ 0.43
SNRPA1-215ENST00000561187 PRR27Q6MZM9 219 aa17.7■□□□□ 0.42
SNRPA1-215ENST00000561187 C15orf54Q8N8G6 183 aa17.7■□□□□ 0.42
SNRPA1-215ENST00000561187 NEXN-AS1Q8NBZ9 246 aa17.7■□□□□ 0.42
SNRPA1-215ENST00000561187 ELOBQ15370 118 aa17.69■□□□□ 0.42
SNRPA1-215ENST00000561187 MPV17L2Q567V2 206 aa17.68■□□□□ 0.42
SNRPA1-215ENST00000561187 CHCHD7Q9BUK0 85 aa17.68■□□□□ 0.42
SNRPA1-215ENST00000561187 C1orf43Q9BWL3 253 aa17.68■□□□□ 0.42
SNRPA1-215ENST00000561187 TRBV6-8A0A0A6YYG3 113 aa17.67■□□□□ 0.42
SNRPA1-215ENST00000561187 CRPP02741 224 aa17.67■□□□□ 0.42
SNRPA1-215ENST00000561187 RGS21Q2M5E4 152 aa17.67■□□□□ 0.42
SNRPA1-215ENST00000561187 PFDN1O60925 122 aa17.66■□□□□ 0.42
SNRPA1-215ENST00000561187 RAB4BP61018 213 aa17.66■□□□□ 0.42
SNRPA1-215ENST00000561187 BAGE2Q86Y30 109 aa17.66■□□□□ 0.42
SNRPA1-215ENST00000561187 OR10G8Q8NGN5 311 aa17.66■□□□□ 0.42
SNRPA1-215ENST00000561187 CHCHD5Q9BSY4 110 aa17.66■□□□□ 0.42
SNRPA1-215ENST00000561187 ZNF471Q9BX82 626 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-215ENST00000561187 F5H697 171 aa17.65■□□□□ 0.42
SNRPA1-215ENST00000561187 HLA-DQA1P01909 254 aa17.65■□□□□ 0.42
SNRPA1-215ENST00000561187 ANGP03950 147 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-215ENST00000561187 SPANXN1Q5VSR9 72 aa17.65■□□□□ 0.42
SNRPA1-215ENST00000561187 CLPSL2Q6UWE3 100 aa17.65■□□□□ 0.42
SNRPA1-215ENST00000561187 ENHOQ6UWT2 76 aa17.65■□□□□ 0.42
SNRPA1-215ENST00000561187 LRP1Q07954 4544 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-215ENST00000561187 Q0VG73 95 aa17.64■□□□□ 0.41
SNRPA1-215ENST00000561187 ATRAIDQ6UW56 229 aa17.64■□□□□ 0.41
SNRPA1-215ENST00000561187 KCNRGQ8N5I3 272 aa17.64■□□□□ 0.41
SNRPA1-215ENST00000561187 CHAC1Q9BUX1 264 aa17.64■□□□□ 0.41
SNRPA1-215ENST00000561187 CIRBP-AS1Q8TBR5 109 aa17.63■□□□□ 0.41
SNRPA1-215ENST00000561187 DEFB104AQ8WTQ1 72 aa17.62■□□□□ 0.41
SNRPA1-215ENST00000561187 MBD3L1Q8WWY6 194 aa17.62■□□□□ 0.41
SNRPA1-215ENST00000561187 SNAI2O43623 268 aa17.61■□□□□ 0.41
SNRPA1-215ENST00000561187 S100A9P06702 114 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-215ENST00000561187 MLST8Q9BVC4 326 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms