RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 A0A087WWL8 130 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 MUC21A0A0G2JKD1 596 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 MUC21A0A140T8X8 626 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 RHODO00212 210 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 SIVA1O15304 175 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 SH2D6Q7Z4S9 175 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 NUDT10Q8NFP7 164 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 NUDT11Q96G61 164 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 DNAH11Q96DT5 4516 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 PKD1P98161 4303 aa10.42□□□□□ -0.74
SNRPA1-213ENST00000560856 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
SNRPA1-213ENST00000560856 P01737 135 aa10.41□□□□□ -0.74
SNRPA1-213ENST00000560856 SRP19P09132 144 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-213ENST00000560856 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-213ENST00000560856 C6orf223Q8N319 242 aa10.41□□□□□ -0.74
SNRPA1-213ENST00000560856 BIN3Q9NQY0 253 aa10.41□□□□□ -0.74
SNRPA1-213ENST00000560856 TTC32Q5I0X7 151 aa10.4□□□□□ -0.74
SNRPA1-213ENST00000560856 FAM74A4Q5TZK3 123 aa10.4□□□□□ -0.74
SNRPA1-213ENST00000560856 WFDC10BQ8IUB3 73 aa10.4□□□□□ -0.74
SNRPA1-213ENST00000560856 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
SNRPA1-213ENST00000560856 KIF25-AS1Q9Y6Z4 181 aa10.4□□□□□ -0.74
SNRPA1-213ENST00000560856 DYNC1H1Q14204 4646 aaKnown RBP10.39□□□□□ -0.75
SNRPA1-213ENST00000560856 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
SNRPA1-213ENST00000560856 LINC00315P59091 139 aa10.39□□□□□ -0.75
SNRPA1-213ENST00000560856 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
SNRPA1-213ENST00000560856 RNASE7Q9H1E1 156 aaKnown RBP10.39□□□□□ -0.75
SNRPA1-213ENST00000560856 LY96Q9Y6Y9 160 aa10.39□□□□□ -0.75
SNRPA1-213ENST00000560856 GAGE12JA6NER3 117 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 C9JQL5 133 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 GAGE1Q13065 139 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 GAGE4Q13068 117 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 GAGE5Q13069 117 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 SOHLH1Q5JUK2 328 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 MSRB1Q9NZV6 116 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 PKHD1P08F94 4074 aa10.38□□□□□ -0.75
SNRPA1-213ENST00000560856 DNAH10OSP0CZ25 163 aa10.37□□□□□ -0.75
SNRPA1-213ENST00000560856 CEBPGP53567 150 aa10.37□□□□□ -0.75
SNRPA1-213ENST00000560856 SSTP61278 116 aa10.37□□□□□ -0.75
SNRPA1-213ENST00000560856 SMIM7Q9BQ49 75 aa10.37□□□□□ -0.75
SNRPA1-213ENST00000560856 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-213ENST00000560856 XKRY2A2RUG3 117 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 F2Z2F3 143 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 BTF3P20290 206 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 CTRLP40313 264 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 RAB4BP61018 213 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 SRSF3P84103 164 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 TNP2Q05952 138 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 LELP1Q5T871 98 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
SNRPA1-213ENST00000560856 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 CACNG7P62955 275 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 WDR73Q6P4I2 378 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 Q6ZRN7 208 aaPredicted RBP10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 LINC01551Q86U37 167 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 OR10G8Q8NGN5 311 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
SNRPA1-213ENST00000560856 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
SNRPA1-213ENST00000560856 GTSF1Q8WW33 167 aa10.34□□□□□ -0.75
SNRPA1-213ENST00000560856 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
SNRPA1-213ENST00000560856 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
SNRPA1-213ENST00000560856 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
SNRPA1-213ENST00000560856 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
SNRPA1-213ENST00000560856 UBE2D3P61077 147 aa10.33□□□□□ -0.76
SNRPA1-213ENST00000560856 UBE2D2P62837 147 aa10.33□□□□□ -0.76
SNRPA1-213ENST00000560856 LINC01556Q5JQF7 62 aa10.33□□□□□ -0.76
SNRPA1-213ENST00000560856 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
SNRPA1-213ENST00000560856 TRAV8-6A0A0B4J262 113 aa10.32□□□□□ -0.76
SNRPA1-213ENST00000560856 K7EP13 123 aa10.32□□□□□ -0.76
SNRPA1-213ENST00000560856 NTF3P20783 257 aa10.32□□□□□ -0.76
SNRPA1-213ENST00000560856 ZNF56Q15929 161 aa10.32□□□□□ -0.76
SNRPA1-213ENST00000560856 OR10J3Q5JRS4 329 aa10.32□□□□□ -0.76
SNRPA1-213ENST00000560856 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
SNRPA1-213ENST00000560856 TRBV7-3A0A075B6L6 115 aa10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 TRAV9-2A0A087WT02 112 aa10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 EVI2AP22794 236 aa10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 FOXA3P55318 350 aaPredicted RBP10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 PEA15Q15121 130 aa10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 CT83Q5H943 113 aa10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
SNRPA1-213ENST00000560856 A8MWL6 223 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 F5H697 171 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 M0QY20 66 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 ERVFC1-1P60608 527 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 TMEM241Q24JQ0 296 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 FAM74A3Q4VXF1 159 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 Q8N3U1 123 aa10.3□□□□□ -0.76
SNRPA1-213ENST00000560856 A0A087WWC5 75 aa10.29□□□□□ -0.76
SNRPA1-213ENST00000560856 TRGC1P0CF51 173 aa10.29□□□□□ -0.76
SNRPA1-213ENST00000560856 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms