RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 IL36BQ9NZH7 164 aa7.44□□□□□ -1.22
GABPB1-210ENST00000560825 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
GABPB1-210ENST00000560825 TRAV9-2A0A087WT02 112 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 LECT2O14960 151 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 MGST1P10620 155 aaKnown RBP7.43□□□□□ -1.22
GABPB1-210ENST00000560825 S100A4P26447 101 aaKnown RBP7.43□□□□□ -1.22
GABPB1-210ENST00000560825 LELP1Q5T871 98 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 NFE4Q86UQ8 179 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 HIST1H2BAQ96A08 127 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 PRADC1Q9BSG0 188 aa7.43□□□□□ -1.22
GABPB1-210ENST00000560825 M0R381 172 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 DNLZQ5SXM8 178 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 FAM213BQ8TBF2 198 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 SFT2D1Q8WV19 159 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 DERL1Q9BUN8 251 aa7.42□□□□□ -1.22
GABPB1-210ENST00000560825 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 A8MWV9 139 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 ZNF345Q14585 488 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 LINC01620Q4KN68 170 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 FAM162BQ5T6X4 162 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 Q8N814 137 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 OR10AG1Q8NH19 301 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 MBD3L1Q8WWY6 194 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 FMC1Q96HJ9 113 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 ZFP30Q9Y2G7 519 aa7.41□□□□□ -1.22
GABPB1-210ENST00000560825 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 TRBV6-1A0A0K0K1D8 114 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 BCL2L11O43521 198 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 GCSHP23434 173 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 UBE2G1P62253 170 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 SH2D6Q7Z4S9 175 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 SFRP2Q96HF1 295 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 MLST8Q9BVC4 326 aa7.4□□□□□ -1.22
GABPB1-210ENST00000560825 ZNF471Q9BX82 626 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-210ENST00000560825 A6NJY4 79 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 K7EP13 123 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 EREGO14944 169 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 SEC11BP0C7V7 166 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 AKR1C3P42330 323 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 SSTP61278 116 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 Q5VSD8 79 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 C10orf126Q8N4M7 172 aa7.39□□□□□ -1.23
GABPB1-210ENST00000560825 NKX6-2Q9C056 277 aaPredicted RBP7.39□□□□□ -1.23
GABPB1-210ENST00000560825 IGLV5-52A0A0A0MRZ9 124 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 HMSDA8MTL9 139 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 PSCAO43653 123 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 CIDEAO60543 219 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 C1QBP02746 253 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 PIK3CD-AS1Q5SR53 167 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 TMUB2Q71RG4 321 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 PHLDA3Q9Y5J5 127 aa7.38□□□□□ -1.23
GABPB1-210ENST00000560825 GZMBP10144 247 aa7.37□□□□□ -1.23
GABPB1-210ENST00000560825 PRR27Q6MZM9 219 aa7.37□□□□□ -1.23
GABPB1-210ENST00000560825 LRP1Q07954 4544 aaKnown RBP7.37□□□□□ -1.23
GABPB1-210ENST00000560825 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
GABPB1-210ENST00000560825 TPT1P13693 172 aaKnown RBP7.36□□□□□ -1.23
GABPB1-210ENST00000560825 UBE2D3P61077 147 aa7.36□□□□□ -1.23
GABPB1-210ENST00000560825 UBE2D2P62837 147 aa7.36□□□□□ -1.23
GABPB1-210ENST00000560825 NIT1Q86X76 327 aa7.36□□□□□ -1.23
GABPB1-210ENST00000560825 STOML3Q8TAV4 291 aa7.36□□□□□ -1.23
GABPB1-210ENST00000560825 BAALCQ8WXS3 180 aa7.36□□□□□ -1.23
GABPB1-210ENST00000560825 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-210ENST00000560825 RAB19A4D1S5 217 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 RBFOX3A6NFN3 312 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 H2AFB1P0C5Y9 115 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 RPL35P42766 123 aaKnown RBP7.35□□□□□ -1.23
GABPB1-210ENST00000560825 LAGE3Q14657 143 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 BAGE2Q86Y30 109 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 SYT8Q8NBV8 401 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 KIF25-AS1Q9Y6Z4 181 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 TRBV20OR9-2A0A075B6H5 130 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 A0A0D9SG52 128 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 KANTRA0A1W2PQU2 76 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 SNAI2O43623 268 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 ZFP82Q8N141 532 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 NEXN-AS1Q8NBZ9 246 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-210ENST00000560825 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-210ENST00000560825 GNG13Q9P2W3 67 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 KLK12Q9UKR0 248 aa7.35□□□□□ -1.23
GABPB1-210ENST00000560825 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-210ENST00000560825 UMAD1C9J7I0 102 aa7.34□□□□□ -1.23
GABPB1-210ENST00000560825 RHODO00212 210 aa7.34□□□□□ -1.23
GABPB1-210ENST00000560825 INAFM2P0DMQ5 153 aa7.34□□□□□ -1.23
GABPB1-210ENST00000560825 NTM-AS1Q6ZSK4 140 aa7.34□□□□□ -1.23
GABPB1-210ENST00000560825 TCEAL7Q9BRU2 100 aa7.34□□□□□ -1.23
GABPB1-210ENST00000560825 ZNF56Q15929 161 aa7.33□□□□□ -1.24
GABPB1-210ENST00000560825 CENPWQ5EE01 88 aa7.33□□□□□ -1.24
GABPB1-210ENST00000560825 ENHOQ6UWT2 76 aa7.33□□□□□ -1.24
GABPB1-210ENST00000560825 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
GABPB1-210ENST00000560825 C11orf52Q96A22 123 aa7.33□□□□□ -1.24
GABPB1-210ENST00000560825 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms