RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
PBX1-219ENST00000560641 A0A0J9YXY3 114 aa12.01□□□□□ -0.49
PBX1-219ENST00000560641 LST1O00453 97 aa12.01□□□□□ -0.49
PBX1-219ENST00000560641 RNASE4P34096 147 aaKnown RBP12.01□□□□□ -0.49
PBX1-219ENST00000560641 ARL3P36405 182 aa12.01□□□□□ -0.49
PBX1-219ENST00000560641 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
PBX1-219ENST00000560641 ICE1Q9Y2F5 2266 aa12.01□□□□□ -0.49
PBX1-219ENST00000560641 RPL39P62891 51 aaKnown RBP12.01□□□□□ -0.49
PBX1-219ENST00000560641 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
PBX1-219ENST00000560641 CUL9Q8IWT3 2517 aa12□□□□□ -0.49
PBX1-219ENST00000560641 DEFB109BQ30KR1 87 aa12□□□□□ -0.49
PBX1-219ENST00000560641 NRGNQ92686 78 aa12□□□□□ -0.49
PBX1-219ENST00000560641 TMEM101Q96IK0 257 aa12□□□□□ -0.49
PBX1-219ENST00000560641 PRO3102Q9H379 93 aa12□□□□□ -0.49
PBX1-219ENST00000560641 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
PBX1-219ENST00000560641 IGF1P05019 195 aa11.99□□□□□ -0.49
PBX1-219ENST00000560641 EMP1P54849 157 aa11.99□□□□□ -0.49
PBX1-219ENST00000560641 DNAJC30Q96LL9 226 aa11.99□□□□□ -0.49
PBX1-219ENST00000560641 VMO1Q7Z5L0 202 aa11.99□□□□□ -0.49
PBX1-219ENST00000560641 IGHV4-39P01824 125 aa11.98□□□□□ -0.49
PBX1-219ENST00000560641 SMG1Q96Q15 3661 aaKnown RBP11.98□□□□□ -0.49
PBX1-219ENST00000560641 COX6CP09669 75 aa11.98□□□□□ -0.49
PBX1-219ENST00000560641 IGHV3-66A0A0C4DH42 116 aa11.97□□□□□ -0.49
PBX1-219ENST00000560641 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
PBX1-219ENST00000560641 KLLNB2CW77 178 aa11.97□□□□□ -0.49
PBX1-219ENST00000560641 TIMM17BO60830 172 aa11.97□□□□□ -0.49
PBX1-219ENST00000560641 YAE1D1Q9NRH1 226 aa11.97□□□□□ -0.49
PBX1-219ENST00000560641 Q1RN00 199 aa11.96□□□□□ -0.49
PBX1-219ENST00000560641 CLEC19AQ6UXS0 136 aa11.96□□□□□ -0.49
PBX1-219ENST00000560641 A0A1B0GX51 115 aa11.96□□□□□ -0.49
PBX1-219ENST00000560641 MUC4Q99102 2169 aa11.96□□□□□ -0.5
PBX1-219ENST00000560641 KALRNO60229 2985 aa11.96□□□□□ -0.5
PBX1-219ENST00000560641 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.5
PBX1-219ENST00000560641 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.5
PBX1-219ENST00000560641 PYGO1Q9Y3Y4 419 aa11.96□□□□□ -0.5
PBX1-219ENST00000560641 ZNF56Q15929 161 aa11.95□□□□□ -0.5
PBX1-219ENST00000560641 MIAQ16674 131 aa11.95□□□□□ -0.5
PBX1-219ENST00000560641 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
PBX1-219ENST00000560641 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
PBX1-219ENST00000560641 GNRH2O43555 120 aa11.95□□□□□ -0.5
PBX1-219ENST00000560641 UBE2E1P51965 193 aa11.95□□□□□ -0.5
PBX1-219ENST00000560641 ATP6V0E1O15342 81 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 CXCL5P42830 114 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 MRPS36P82909 103 aaKnown RBP11.94□□□□□ -0.5
PBX1-219ENST00000560641 C3orf22Q8N5N4 141 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 C20orf203Q8NBC4 194 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 UQCRQO14949 82 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 LRRC75A-AS1Q8N1F1 130 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 LINC00526Q96FQ7 95 aa11.94□□□□□ -0.5
PBX1-219ENST00000560641 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
PBX1-219ENST00000560641 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
PBX1-219ENST00000560641 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
PBX1-219ENST00000560641 TMEM61Q8N0U2 210 aa11.93□□□□□ -0.5
PBX1-219ENST00000560641 C9orf85Q96MD7 179 aa11.93□□□□□ -0.5
PBX1-219ENST00000560641 IGLV4-3A0A075B6K6 122 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 H7C2G1 150 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 M0QY20 66 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 CD3EP07766 207 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 ZFHX4Q86UP3 3567 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 PRRC2CQ9Y520 2896 aaKnown RBP11.92□□□□□ -0.5
PBX1-219ENST00000560641 NDUFA7O95182 113 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 PPDPFQ9H3Y8 114 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 SPRY2O43597 315 aa11.92□□□□□ -0.5
PBX1-219ENST00000560641 RPS28P62857 69 aaKnown RBP11.91□□□□□ -0.5
PBX1-219ENST00000560641 NDUFA4O00483 81 aa11.91□□□□□ -0.5
PBX1-219ENST00000560641 IGHV1-58A0A0C4DH39 117 aa11.9□□□□□ -0.5
PBX1-219ENST00000560641 C5orf38Q86SI9 138 aa11.9□□□□□ -0.5
PBX1-219ENST00000560641 ZNF256Q9Y2P7 627 aaPredicted RBP11.9□□□□□ -0.5
PBX1-219ENST00000560641 IGHV3OR16-13A0A075B7E8 117 aa11.9□□□□□ -0.51
PBX1-219ENST00000560641 IGHV3-74A0A0B4J1X5 117 aa11.9□□□□□ -0.51
PBX1-219ENST00000560641 I3L3M4 83 aa11.9□□□□□ -0.51
PBX1-219ENST00000560641 ECSCRQ19T08 205 aa11.9□□□□□ -0.51
PBX1-219ENST00000560641 FAM104AQ969W3 186 aa11.9□□□□□ -0.51
PBX1-219ENST00000560641 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
PBX1-219ENST00000560641 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
PBX1-219ENST00000560641 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
PBX1-219ENST00000560641 FAM236AA0A1B0GUQ0 79 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 FAM236BA0A1B0GV22 79 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 HIST1H4AP62805 103 aaKnown RBP11.88□□□□□ -0.51
PBX1-219ENST00000560641 SIRPDQ9H106 197 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 DCHS1Q96JQ0 3298 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 LOC400499M0QZD8 3231 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 A0A0J9YXV3 536 aa11.88□□□□□ -0.51
PBX1-219ENST00000560641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.88□□□□□ -0.51
PBX1-219ENST00000560641 IGHV3-49A0A0A0MS15 119 aa11.87□□□□□ -0.51
PBX1-219ENST00000560641 C5orf47Q569G3 176 aa11.87□□□□□ -0.51
PBX1-219ENST00000560641 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
PBX1-219ENST00000560641 PEMTQ9UBM1 199 aa11.86□□□□□ -0.51
PBX1-219ENST00000560641 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
PBX1-219ENST00000560641 CRYGAP11844 174 aa11.86□□□□□ -0.51
PBX1-219ENST00000560641 VSIG2Q96IQ7 327 aa11.86□□□□□ -0.51
PBX1-219ENST00000560641 JPT2Q9H910 190 aa11.86□□□□□ -0.51
PBX1-219ENST00000560641 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
PBX1-219ENST00000560641 CLEC2BQ92478 149 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms