RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 TRBV6-1A0A0K0K1D8 114 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 LOC100131303A0A0U1RQF7 123 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 IGLV2-11P01706 119 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 Q86TA4 180 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 LYPD6BQ8NI32 183 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 SGK494Q96LW2 274 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 COX11Q9Y6N1 276 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 IGHV3-16A0A0C4DH30 117 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 SCO2A0A1W2PP80 73 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 IGHV3-30P01768 117 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 IGHV3-33P01772 117 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 TYMSP04818 313 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 IGHV3-30-3P0DP02 117 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 IGHV3-30-5P0DP03 117 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 MGST1P10620 155 aaKnown RBP6.4□□□□□ -1.38
HERC1-209ENST00000560519 SLC25A29Q8N8R3 303 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 TVP23CQ96ET8 276 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 LINC00479Q96M42 142 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 FAM30AQ9NZY2 134 aa6.4□□□□□ -1.38
HERC1-209ENST00000560519 RBFOX3A6NFN3 312 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 OXTP01178 125 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 GCGP01275 180 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 LTAP01374 205 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 RAB14P61106 215 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 ZNF876PQ49A33 203 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 RMI2Q96E14 147 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 GTSF1LQ9H1H1 148 aa6.39□□□□□ -1.39
HERC1-209ENST00000560519 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.38□□□□□ -1.39
HERC1-209ENST00000560519 FABP5P3A8MUU1 101 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 NDUFS6O75380 124 aaKnown RBP6.38□□□□□ -1.39
HERC1-209ENST00000560519 RPL35P42766 123 aaKnown RBP6.38□□□□□ -1.39
HERC1-209ENST00000560519 ZNF506Q5JVG8 444 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 SCXQ7RTU7 201 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 BAGE2Q86Y30 109 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 EIF5A2Q9GZV4 153 aaKnown RBP6.38□□□□□ -1.39
HERC1-209ENST00000560519 MED9Q9NWA0 146 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
HERC1-209ENST00000560519 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
HERC1-209ENST00000560519 A0A087WWC5 75 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 TMEM250H0YL14 139 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 RS1O15537 224 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 GNRH2O43555 120 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 FAM162BQ5T6X4 162 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 CFAP126Q5VTH2 177 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 SMIM12Q96EX1 92 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 FAM210AQ96ND0 272 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 BIN3Q9NQY0 253 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 PLA2G2DQ9UNK4 145 aa6.37□□□□□ -1.39
HERC1-209ENST00000560519 GNG4P50150 75 aa6.36□□□□□ -1.39
HERC1-209ENST00000560519 ZNF80P51504 273 aaPredicted RBP6.36□□□□□ -1.39
HERC1-209ENST00000560519 Q8N976 141 aa6.36□□□□□ -1.39
HERC1-209ENST00000560519 PTH2Q96A98 100 aa6.36□□□□□ -1.39
HERC1-209ENST00000560519 ZC2HC1AQ96GY0 325 aa6.36□□□□□ -1.39
HERC1-209ENST00000560519 A8MWV9 139 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 LECT2O14960 151 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 WFDC2Q14508 124 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 PEA15Q15121 130 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 ZNF674Q2M3X9 581 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 CENPWQ5EE01 88 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 DERL1Q9BUN8 251 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 CHAC1Q9BUX1 264 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 SMDT1Q9H4I9 107 aa6.35□□□□□ -1.39
HERC1-209ENST00000560519 IGHV3-73A0A0B4J1V6 119 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 SH2D1AO60880 128 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 IGLV2-8P01709 118 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 PIK3CD-AS1Q5SR53 167 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 KCNIP4Q6PIL6 250 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 ZFP2Q6ZN57 461 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
HERC1-209ENST00000560519 C9orf85Q96MD7 179 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 CHCHD7Q9BUK0 85 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
HERC1-209ENST00000560519 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
HERC1-209ENST00000560519 RAB19A4D1S5 217 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 B4DEV8 164 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 S100A4P26447 101 aaKnown RBP6.33□□□□□ -1.4
HERC1-209ENST00000560519 ASIPP42127 132 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 CRIP1P50238 77 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 CEBPGP53567 150 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 ELOBQ15370 118 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 LINC01559Q495D7 138 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 PRR27Q6MZM9 219 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
HERC1-209ENST00000560519 PARLQ9H300 379 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
HERC1-209ENST00000560519 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
HERC1-209ENST00000560519 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 GAGE12JA6NER3 117 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 KRBOX1C9JBD0 128 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 M0R036 132 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 RHODO00212 210 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 SRP19P09132 144 aaKnown RBP6.32□□□□□ -1.4
HERC1-209ENST00000560519 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
HERC1-209ENST00000560519 GAGE1Q13065 139 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms