RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 DAZ4Q86SG3 579 aaKnown RBP6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 SLC7A5P1Q8MH63 180 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 RMI2Q96E14 147 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 TREM1Q9NP99 234 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 DAZ3Q9NR90 486 aaKnown RBP6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 URGCP-MRPS24S4R325 110 aa6.93□□□□□ -1.3
CDC42BPB-207ENST00000560492 IGKV2D-24A0A075B6R9 120 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 TRBV6-4A0A1B0GX49 114 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 HMGB3O15347 200 aaKnown RBP6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 RS1O15537 224 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 IFNA1P01562 189 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 GAGE1Q13065 139 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 GAGE4Q13068 117 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 GAGE5Q13069 117 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 KHDC3LQ587J8 217 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 LCE4AQ5TA78 99 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 GOLT1AQ6ZVE7 132 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 RAB24Q969Q5 203 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 NDFIP1Q9BT67 221 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 MED9Q9NWA0 146 aa6.92□□□□□ -1.3
CDC42BPB-207ENST00000560492 PGPA6NDG6 321 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 CXorf1O96002 111 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 ZNF726P1Q15940 193 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 CFAP126Q5VTH2 177 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 MBD3L1Q8WWY6 194 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
CDC42BPB-207ENST00000560492 TRAV8-1A0A0A6YYK1 113 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 RAB19A4D1S5 217 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 CIDEAO60543 219 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 ATP6V1G1O75348 118 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 EIF3GO75821 320 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 ARL14EPLP0DKL9 152 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 RPL37AP61513 92 aaKnown RBP6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 Q8N976 141 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 CIRBP-AS1Q8TBR5 109 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 SGK494Q96LW2 274 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 EIF5A2Q9GZV4 153 aaKnown RBP6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 OTORQ9NRC9 128 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 GNG13Q9P2W3 67 aa6.9□□□□□ -1.3
CDC42BPB-207ENST00000560492 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 STAG3L2P0CL84 134 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 STAG3L3P0CL85 134 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 GNG5P63218 68 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 PEA15Q15121 130 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 KCNIP4Q6PIL6 250 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 UQCC3Q6UW78 93 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 PQLC2Q6ZP29 291 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 LYPD6BQ8NI32 183 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 MANBALQ9NQG1 85 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
CDC42BPB-207ENST00000560492 GCHFRP30047 84 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 ZNF506Q5JVG8 444 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 FAM210AQ96ND0 272 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 HMCN2Q8NDA2 5059 aa6.88□□□□□ -1.31
CDC42BPB-207ENST00000560492 A0A087WWC5 75 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 A0A087WX48 190 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 PGPEP1LA6NFU8 196 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 GCGP01275 180 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 BCL2P10415 239 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 S100A4P26447 101 aaKnown RBP6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 CCL20P78556 96 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 TMEM75Q8N9X5 138 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 TVP23CQ96ET8 276 aa6.87□□□□□ -1.31
CDC42BPB-207ENST00000560492 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 K7EQM0 130 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 S100A1P23297 94 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 UBE2G2P60604 165 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 CST9LP1Q5W188 147 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 CYB561D1Q8N8Q1 229 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 DNAJC30Q96LL9 226 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 SMDT1Q9H4I9 107 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 VAX2Q9UIW0 290 aa6.86□□□□□ -1.31
CDC42BPB-207ENST00000560492 A8MWV9 139 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 PAGE4O60829 102 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 CEBPGP53567 150 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 C14orf177Q52M58 125 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 C9orf85Q96MD7 179 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 SAMD10Q9BYL1 202 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 PARLQ9H300 379 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
CDC42BPB-207ENST00000560492 KRBOX1C9JBD0 128 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 IGLV2-11P01706 119 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 CRPP02741 224 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 ZNF80P51504 273 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 MEF2BQ02080 365 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 ELOBQ15370 118 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 SMUG1Q53HV7 270 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms