RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 CXCL1P09341 107 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 RAB5CP51148 216 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 GAGE1Q13065 139 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 GAGE4Q13068 117 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 GAGE5Q13069 117 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 ELOBQ15370 118 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 Q9HAA7 133 aa9.48□□□□□ -0.89
TPM1-223ENST00000560445 A0A1B0GV50 99 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 M0R381 172 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 IGHV3-33P01772 117 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 CRIP1P50238 77 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
TPM1-223ENST00000560445 FRZBQ92765 325 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
TPM1-223ENST00000560445 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 CHCHD7Q9BUK0 85 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 MANBALQ9NQG1 85 aa9.47□□□□□ -0.89
TPM1-223ENST00000560445 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.89
TPM1-223ENST00000560445 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.9
TPM1-223ENST00000560445 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
TPM1-223ENST00000560445 PKIAP61925 76 aa9.46□□□□□ -0.9
TPM1-223ENST00000560445 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
TPM1-223ENST00000560445 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
TPM1-223ENST00000560445 BAGE2Q86Y30 109 aa9.45□□□□□ -0.9
TPM1-223ENST00000560445 HSPG2P98160 4391 aa9.44□□□□□ -0.9
TPM1-223ENST00000560445 A0A087WX48 190 aa9.44□□□□□ -0.9
TPM1-223ENST00000560445 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
TPM1-223ENST00000560445 Q8N814 137 aa9.44□□□□□ -0.9
TPM1-223ENST00000560445 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 SCO2A0A1W2PP80 73 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 C1QBP02746 253 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 SMIM17P0DL12 118 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 RAB4BP61018 213 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 TMEM97Q5BJF2 176 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 SPANXN1Q5VSR9 72 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 Q6ZSN1 163 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 TCTE3Q8IZS6 198 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 GNG13Q9P2W3 67 aa9.43□□□□□ -0.9
TPM1-223ENST00000560445 A0A087WWL8 130 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 LRCOL1A6NCL2 159 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 IFNA1P01562 189 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 ZNF56Q15929 161 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 C14orf178Q8N769 122 aaPredicted RBP9.42□□□□□ -0.9
TPM1-223ENST00000560445 SMIM12Q96EX1 92 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 JPT2Q9H910 190 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
TPM1-223ENST00000560445 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 DNAH5Q8TE73 4624 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 XKRY2A2RUG3 117 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 RPS20P60866 119 aaKnown RBP9.41□□□□□ -0.9
TPM1-223ENST00000560445 Q0VG73 95 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 PRR27Q6MZM9 219 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 SLC51BQ86UW2 128 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 DAZAP1Q96EP5 407 aaKnown RBP9.41□□□□□ -0.9
TPM1-223ENST00000560445 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
TPM1-223ENST00000560445 TAGLN2P37802 199 aaKnown RBP9.4□□□□□ -0.9
TPM1-223ENST00000560445 RPL35P42766 123 aaKnown RBP9.4□□□□□ -0.9
TPM1-223ENST00000560445 SULT1A2P50226 295 aa9.4□□□□□ -0.9
TPM1-223ENST00000560445 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
TPM1-223ENST00000560445 NIT1Q86X76 327 aa9.4□□□□□ -0.9
TPM1-223ENST00000560445 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.9
TPM1-223ENST00000560445 MLST8Q9BVC4 326 aa9.4□□□□□ -0.9
TPM1-223ENST00000560445 RBFOX3A6NFN3 312 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 SNAI2O43623 268 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 PDE6DO43924 150 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 UBE2D3P61077 147 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 UBE2D2P62837 147 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 DAZ4Q86SG3 579 aaKnown RBP9.39□□□□□ -0.91
TPM1-223ENST00000560445 Q8N976 141 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 C11orf52Q96A22 123 aa9.39□□□□□ -0.91
TPM1-223ENST00000560445 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
TPM1-223ENST00000560445 DAZ3Q9NR90 486 aaKnown RBP9.39□□□□□ -0.91
TPM1-223ENST00000560445 F5H697 171 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 H7C1H1 209 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 CRPP02741 224 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 XGP55808 180 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 CCL20P78556 96 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
TPM1-223ENST00000560445 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
TPM1-223ENST00000560445 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
TPM1-223ENST00000560445 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
TPM1-223ENST00000560445 FUSP35637 526 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM1-223ENST00000560445 GNG4P50150 75 aa9.37□□□□□ -0.91
TPM1-223ENST00000560445 CACNG7P62955 275 aa9.37□□□□□ -0.91
TPM1-223ENST00000560445 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
TPM1-223ENST00000560445 Q5VSD8 79 aa9.37□□□□□ -0.91
TPM1-223ENST00000560445 Q6ZNX1 250 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms