RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 TPPP3Q9BW30 176 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 C7orf77A4D0Y5 90 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 S100A8P05109 93 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 CRYGDP07320 174 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 SMIM17P0DL12 118 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 GATA1P15976 413 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-215ENST00000559774 RIGQ13278 110 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 FHL2Q14192 279 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 C15orf53Q8NAA6 179 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 ZNF479Q96JC4 524 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 BTF3L4Q96K17 158 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 PGLYRP4Q96LB8 373 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 HHLA3Q9XRX5 114 aa6.12□□□□□ -1.43
LRRC28-215ENST00000559774 TRGV4A0A0C4DH28 118 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 F5H768 121 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 S100PP25815 95 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 RAB4BP61018 213 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 TWIST1Q15672 202 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 KCNIP4Q6PIL6 250 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 RASL11AQ6T310 242 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 TMEM191AQ9H0A3 160 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 DPH3P1Q9H4G8 78 aa6.11□□□□□ -1.43
LRRC28-215ENST00000559774 TRBV10-1A0A0K0K1A3 114 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 HOXA5P20719 270 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 CRYBA4P53673 196 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 RHOHQ15669 191 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 PRADC1Q9BSG0 188 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 RPS10P5Q9NQ39 176 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 KIF25-AS1Q9Y6Z4 181 aa6.1□□□□□ -1.43
LRRC28-215ENST00000559774 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 A0A1B0GXF2 115 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 H7C1H1 209 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 PAX4O43316 350 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 HTN3P15516 51 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 EVI2AP22794 236 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 LINC00315P59091 139 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 HBBP68871 147 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 COX19Q49B96 90 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 CASC10Q5T4H9 136 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 C14orf178Q8N769 122 aaPredicted RBP6.09□□□□□ -1.43
LRRC28-215ENST00000559774 GATD1Q8NB37 220 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 SAMD10Q9BYL1 202 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 JPT2Q9H910 190 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 MSRB1Q9NZV6 116 aa6.09□□□□□ -1.43
LRRC28-215ENST00000559774 A0A087WWL8 130 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 IGLL5B9A064 214 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 K7EQD1 137 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 FAM3BP58499 235 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-215ENST00000559774 MRPL23Q16540 153 aaKnown RBP6.08□□□□□ -1.44
LRRC28-215ENST00000559774 FAM74A4Q5TZK3 123 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 TMEM88Q6PEY1 159 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 SLC25A29Q8N8R3 303 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 VSIG2Q96IQ7 327 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 MUC4Q99102 2169 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
LRRC28-215ENST00000559774 F5H697 171 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 PPP1R17O96001 155 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 SSTP61278 116 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 ZNF56Q15929 161 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 MRAP2Q96G30 205 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 DNAJC30Q96LL9 226 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 APLNQ9ULZ1 77 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 ICOSQ9Y6W8 199 aa6.07□□□□□ -1.44
LRRC28-215ENST00000559774 TRBV24-1A0A075B6N3 115 aa6.06□□□□□ -1.44
LRRC28-215ENST00000559774 M0QY20 66 aa6.06□□□□□ -1.44
LRRC28-215ENST00000559774 S100A1P23297 94 aa6.06□□□□□ -1.44
LRRC28-215ENST00000559774 TIRAPP58753 221 aa6.06□□□□□ -1.44
LRRC28-215ENST00000559774 FAM104BQ5XKR9 115 aa6.06□□□□□ -1.44
LRRC28-215ENST00000559774 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.06□□□□□ -1.44
LRRC28-215ENST00000559774 SMCO4Q9NRQ5 59 aa6.06□□□□□ -1.44
LRRC28-215ENST00000559774 TRBV7-3A0A075B6L6 115 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 IGHV3-73A0A0B4J1V6 119 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 A0A0J9YY99 117 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 LCE2BO14633 110 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 PPBPP02775 128 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 MT-ND6P03923 174 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 GYPEP15421 78 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 RAB4AP20338 218 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 SRIP30626 198 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 CAMPP49913 170 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 RPL36AP83881 106 aaKnown RBP6.05□□□□□ -1.44
LRRC28-215ENST00000559774 ZFAND6Q6FIF0 208 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 MRPL54Q6P161 138 aaKnown RBP6.05□□□□□ -1.44
LRRC28-215ENST00000559774 Q6ZSN1 163 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 NEGR1Q7Z3B1 354 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 RPL36ALQ969Q0 106 aaKnown RBP6.05□□□□□ -1.44
LRRC28-215ENST00000559774 GNB1LQ9BYB4 327 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 NIT2Q9NQR4 276 aa6.05□□□□□ -1.44
LRRC28-215ENST00000559774 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
LRRC28-215ENST00000559774 A0A096LPF7 62 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 TRBV6-5A0A0K0K1A5 114 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 PHOX2AO14813 284 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 HLA-DQA1P01909 254 aa6.04□□□□□ -1.44
LRRC28-215ENST00000559774 MGPP08493 103 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms