RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 LAMA1P25391 3075 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 C9JAW5 83 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 Q6ZS46 218 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 PRR25Q96S07 402 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 AKAP13Q12802 2813 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 FAM167A-AS1Q96KT0 104 aa8.19□□□□□ -1.1
CARMIL3-202ENST00000559694 G3V4G9 280 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 APOC4P55056 127 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 C14orf178Q8N769 122 aaPredicted RBP8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 C12orf74Q32Q52 190 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 HILS1P60008 231 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 CFHR3Q02985 330 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 C4orf3Q8WVX3 66 aa8.18□□□□□ -1.1
CARMIL3-202ENST00000559694 WFDC2Q14508 124 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 PPDPFLQ8WWR9 84 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 TTTY13Q9BZ97 58 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 CRYGBP07316 175 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 SPATA12Q7Z6I5 190 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 TMEM61Q8N0U2 210 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 TRBV25-1A0A075B6N4 114 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 K7EMI3 77 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 CCDC140Q96MF4 163 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 A0A087WWL8 130 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 K7EMT4 169 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 FXYD2P54710 66 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 Q8N8P6 123 aa8.17□□□□□ -1.1
CARMIL3-202ENST00000559694 DNAL4O96015 105 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 SUMO2P61956 95 aaKnown RBP8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 GDF5OSQ5U4N7 250 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 C16orf54Q6UWD8 224 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 RNASE1P07998 156 aaKnown RBP8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 FOXI2Q6ZQN5 318 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 ZNF503Q96F45 646 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 IGLV2-8P01709 118 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 TMEM101Q96IK0 257 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 ZNF48Q96MX3 618 aaPredicted RBP8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 CHCHD5Q9BSY4 110 aa8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 COL27A1Q8IZC6 1860 aaPredicted RBP8.16□□□□□ -1.1
CARMIL3-202ENST00000559694 PRADC1Q9BSG0 188 aa8.15□□□□□ -1.1
CARMIL3-202ENST00000559694 TRAV26-2A0A0B4J265 109 aa8.15□□□□□ -1.1
CARMIL3-202ENST00000559694 ANXA2RQ3ZCQ2 193 aa8.15□□□□□ -1.1
CARMIL3-202ENST00000559694 Q8N6K4 173 aa8.15□□□□□ -1.1
CARMIL3-202ENST00000559694 RAI1Q7Z5J4 1906 aaPredicted RBP8.15□□□□□ -1.1
CARMIL3-202ENST00000559694 C2orf82Q6UX34 121 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 DPH3P1Q9H4G8 78 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 KLF12Q9Y4X4 402 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 IGLL5B9A064 214 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 GAGE7O76087 117 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 GAGE12FP0CL80 117 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 GAGE12GP0CL81 117 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 GAGE12IP0CL82 117 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 LINC00310P59036 64 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 DEFB1P60022 68 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 DAD1P61803 113 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 TAL2Q16559 108 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 ZNF702PQ9H963 129 aa8.15□□□□□ -1.11
CARMIL3-202ENST00000559694 TRBV20-1A0A075B6N2 111 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 F5H768 121 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 RPL36AP83881 106 aaKnown RBP8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 C2orf66Q6UXQ4 117 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 RPL36ALQ969Q0 106 aaKnown RBP8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 EYSQ5T1H1 3165 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 IGKV3D-20A0A0C4DH25 116 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 F8VRH5 84 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 CRLF1O75462 422 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 NDUFA11Q86Y39 141 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
CARMIL3-202ENST00000559694 A0A087WX48 190 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 A0A0U1RRA0 63 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 NPC2P61916 151 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 IGHV3-16A0A0C4DH30 117 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 IGKV1D-37A0A075B6S9 117 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 M0R2P5 195 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 ZMAT4Q9H898 229 aa8.13□□□□□ -1.11
CARMIL3-202ENST00000559694 UBE2DNLQ8IWF7 75 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 PIFOQ8TCI5 191 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 A0A1B0GXF2 115 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 B5MCH6 92 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 EGR2P11161 476 aaPredicted RBP8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 GATA1P15976 413 aaPredicted RBP8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 HLA-DRB4P13762 266 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 HLA-DRB4X5D2U9 266 aa8.12□□□□□ -1.11
CARMIL3-202ENST00000559694 VCYO14598 125 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 LINC00322Q6ZN03 302 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms