RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ERVFC1-1P60608 527 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 ZNF56Q15929 161 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 SPANXN1Q5VSR9 72 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 ALKAL2Q6UX46 152 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 Q6ZSN1 163 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 C9orf62Q8N4C0 152 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 C10orf126Q8N4M7 172 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 C14orf178Q8N769 122 aaPredicted RBP5.57□□□□□ -1.52
SNX1-207ENST00000559401 DAZAP1Q96EP5 407 aaKnown RBP5.57□□□□□ -1.52
SNX1-207ENST00000559401 SFRP2Q96HF1 295 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 MLST8Q9BVC4 326 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 TPPP3Q9BW30 176 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 GTSF1LQ9H1H1 148 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 MED9Q9NWA0 146 aa5.57□□□□□ -1.52
SNX1-207ENST00000559401 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 RAB19A4D1S5 217 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 K7EP13 123 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 PSCAO43653 123 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 CXCL1P09341 107 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 LELP1Q5T871 98 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 OR10AG1Q8NH19 301 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 Q9HAA7 133 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 SCRT2Q9NQ03 307 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 VAX2Q9UIW0 290 aa5.56□□□□□ -1.52
SNX1-207ENST00000559401 SMIM17P0DL12 118 aa5.55□□□□□ -1.52
SNX1-207ENST00000559401 NKX2-5P52952 324 aaPredicted RBP5.55□□□□□ -1.52
SNX1-207ENST00000559401 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
SNX1-207ENST00000559401 LINC01556Q5JQF7 62 aa5.55□□□□□ -1.52
SNX1-207ENST00000559401 UFSP1Q6NVU6 142 aa5.55□□□□□ -1.52
SNX1-207ENST00000559401 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
SNX1-207ENST00000559401 OR2D3Q8NGH3 330 aa5.55□□□□□ -1.52
SNX1-207ENST00000559401 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
SNX1-207ENST00000559401 BOLA1Q9Y3E2 137 aa5.55□□□□□ -1.52
SNX1-207ENST00000559401 F5H697 171 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 SNAI2O43623 268 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 P01737 135 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 GZMBP10144 247 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 TAGLN2P37802 199 aaKnown RBP5.54□□□□□ -1.52
SNX1-207ENST00000559401 CEBPGP53567 150 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 RPS20P60866 119 aaKnown RBP5.54□□□□□ -1.52
SNX1-207ENST00000559401 BLOC1S1P78537 153 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 AP1S3Q96PC3 154 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 BIN3Q9NQY0 253 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 Q9UF83 564 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 URGCP-MRPS24S4R325 110 aa5.54□□□□□ -1.52
SNX1-207ENST00000559401 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 A0A087WWC5 75 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 XKRY2A2RUG3 117 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 RBFOX3A6NFN3 312 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 IGLV2-8P01709 118 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 MGPP08493 103 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 OR5AL1P0C617 328 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 LINC00694P0DN24 101 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 KRTAP10-2P60368 255 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 RAB4BP61018 213 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 FER1L6-AS1Q8NA97 138 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 SMIM12Q96EX1 92 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 KIAA1109Q2LD37 5005 aa5.53□□□□□ -1.52
SNX1-207ENST00000559401 FAT2Q9NYQ8 4349 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 TRBV7-3A0A075B6L6 115 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 A0A087WTM6 91 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 C19orf71A6NCJ1 209 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 IBA57-AS1B1ANH7 110 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 FUSP35637 526 aaKnown RBP eCLIP5.52□□□□□ -1.53
SNX1-207ENST00000559401 TOR2AQ5JU69 321 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 KCNIP4Q6PIL6 250 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 Q8N3U1 123 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.52□□□□□ -1.53
SNX1-207ENST00000559401 SSBP4Q9BWG4 385 aaPredicted RBP5.52□□□□□ -1.53
SNX1-207ENST00000559401 PKD1P98161 4303 aa5.52□□□□□ -1.53
SNX1-207ENST00000559401 A0A087WX48 190 aa5.51□□□□□ -1.53
SNX1-207ENST00000559401 IGLC6P0CF74 106 aa5.51□□□□□ -1.53
SNX1-207ENST00000559401 UBE2D3P61077 147 aa5.51□□□□□ -1.53
SNX1-207ENST00000559401 UBE2D2P62837 147 aa5.51□□□□□ -1.53
SNX1-207ENST00000559401 CACNG7P62955 275 aa5.51□□□□□ -1.53
SNX1-207ENST00000559401 DAZ4Q86SG3 579 aaKnown RBP5.51□□□□□ -1.53
SNX1-207ENST00000559401 EIF5A2Q9GZV4 153 aaKnown RBP5.51□□□□□ -1.53
SNX1-207ENST00000559401 DAZ3Q9NR90 486 aaKnown RBP5.51□□□□□ -1.53
SNX1-207ENST00000559401 TMEM250H0YL14 139 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 TRGC1P0CF51 173 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 LAGE3Q14657 143 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 LYZL1Q6UWQ5 148 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 NEXN-AS1Q8NBZ9 246 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 NUDT10Q8NFP7 164 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 NUDT11Q96G61 164 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 TM2D2Q9BX73 214 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 RNASE7Q9H1E1 156 aaKnown RBP5.5□□□□□ -1.53
SNX1-207ENST00000559401 RPP21Q9H633 154 aaKnown RBP5.5□□□□□ -1.53
SNX1-207ENST00000559401 PGPEP1Q9NXJ5 209 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 HERC2O95714 4834 aa5.5□□□□□ -1.53
SNX1-207ENST00000559401 TRAV8-3A0A0A6YYJ7 113 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 TMEM262E9PQX1 116 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 F2Z2F3 143 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 H7C1H1 209 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 K7EN84 100 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
SNX1-207ENST00000559401 NIT1Q86X76 327 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms