RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TRGV4A0A0C4DH28 118 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 A8MWV9 139 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 NUDT3O95989 172 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 LINC00694P0DN24 101 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 C10orf91Q5T1B1 145 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 FAM74A4Q5TZK3 123 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 TSKUQ8WUA8 353 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 PGLYRP4Q96LB8 373 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 PRO0255Q9UI72 69 aa7.54□□□□□ -1.2
TPM1-217ENST00000559108 HIGD1CA8MV81 97 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 H3BNG1 76 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 K7EQD1 137 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 PAX4O43316 350 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 NTF3P20783 257 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 EVI2AP22794 236 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 RNF212Q495C1 297 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 SPANXN1Q5VSR9 72 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 ZFP2Q6ZN57 461 aa7.53□□□□□ -1.2
TPM1-217ENST00000559108 SMIM27A0A1W2PRY6 76 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 A8MWL6 223 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 F8W036 122 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 GYPEP15421 78 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 TCTAP57738 103 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 ESRGQ1W209 222 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 SLC7A5P1Q8MH63 180 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 LINC00588Q9Y4M8 146 aa7.52□□□□□ -1.21
TPM1-217ENST00000559108 KMT2AQ03164 3969 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 TRBV6-4A0A1B0GX49 114 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 A0A1W2PPQ1 181 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 F2Z2F3 143 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 GAS8-AS1O95177 125 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 LY6G6CO95867 125 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 CACNG7P62955 275 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 LGALS9CQ6DKI2 356 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 C15orf54Q8N8G6 183 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 C15orf53Q8NAA6 179 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 SEC11CQ9BY50 192 aa7.51□□□□□ -1.21
TPM1-217ENST00000559108 CARHSP1Q9Y2V2 147 aaKnown RBP7.51□□□□□ -1.21
TPM1-217ENST00000559108 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
TPM1-217ENST00000559108 AP1S3Q96PC3 154 aa7.5□□□□□ -1.21
TPM1-217ENST00000559108 GFRA4Q9GZZ7 299 aa7.5□□□□□ -1.21
TPM1-217ENST00000559108 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 GAGE12JA6NER3 117 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 RHODO00212 210 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 PNRC1Q12796 327 aaPredicted RBP7.49□□□□□ -1.21
TPM1-217ENST00000559108 GAGE1Q13065 139 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 GAGE4Q13068 117 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 GAGE5Q13069 117 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 TWIST1Q15672 202 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 ZNF56Q15929 161 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 GAGE13Q4V321 117 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 ICOSQ9Y6W8 199 aa7.49□□□□□ -1.21
TPM1-217ENST00000559108 TRAV26-2A0A0B4J265 109 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 A0A1B0GXF2 115 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 M0QY20 66 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 CIDEAO60543 219 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 MGPP08493 103 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 FAM3BP58499 235 aaPredicted RBP7.48□□□□□ -1.21
TPM1-217ENST00000559108 RAB4BP61018 213 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 SLAQ13239 276 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 RHOHQ15669 191 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 LYPD5Q6UWN5 251 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 NEXN-AS1Q8NBZ9 246 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 ZNRF2Q8NHG8 242 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
TPM1-217ENST00000559108 A0A1B0GUT8 65 aa7.47□□□□□ -1.21
TPM1-217ENST00000559108 MRPL23Q16540 153 aaKnown RBP7.47□□□□□ -1.21
TPM1-217ENST00000559108 TRGC1P0CF51 173 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 SRIP30626 198 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 MRPL54Q6P161 138 aaKnown RBP7.46□□□□□ -1.22
TPM1-217ENST00000559108 ATRAIDQ6UW56 229 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 NEGR1Q7Z3B1 354 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 WFDC10BQ8IUB3 73 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 AMN1Q8IY45 258 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 Q8N3U1 123 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 GATD1Q8NB37 220 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 CLRN3Q8NCR9 226 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
TPM1-217ENST00000559108 DPH3P1Q9H4G8 78 aa7.46□□□□□ -1.22
TPM1-217ENST00000559108 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
TPM1-217ENST00000559108 C7orf77A4D0Y5 90 aa7.45□□□□□ -1.22
TPM1-217ENST00000559108 F5H697 171 aa7.45□□□□□ -1.22
TPM1-217ENST00000559108 RPS10P46783 165 aaKnown RBP7.45□□□□□ -1.22
TPM1-217ENST00000559108 UBE2D3P61077 147 aa7.45□□□□□ -1.22
TPM1-217ENST00000559108 UBE2D2P62837 147 aa7.45□□□□□ -1.22
TPM1-217ENST00000559108 PRADC1Q9BSG0 188 aa7.45□□□□□ -1.22
TPM1-217ENST00000559108 MRPS16Q9Y3D3 137 aaKnown RBP7.45□□□□□ -1.22
TPM1-217ENST00000559108 IGHV3-38A0A0C4DH36 116 aa7.44□□□□□ -1.22
TPM1-217ENST00000559108 SMKR1H3BMG3 65 aa7.44□□□□□ -1.22
TPM1-217ENST00000559108 PPP1R2P9O14990 202 aa7.44□□□□□ -1.22
TPM1-217ENST00000559108 MT-ND4LP03901 98 aa7.44□□□□□ -1.22
TPM1-217ENST00000559108 SMIM17P0DL12 118 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms