RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GYPEP15421 78 aa7.87□□□□□ -1.15
SNX1-204ENST00000559061 ZFP2Q6ZN57 461 aa7.87□□□□□ -1.15
SNX1-204ENST00000559061 FER1L6-AS1Q8NA97 138 aa7.87□□□□□ -1.15
SNX1-204ENST00000559061 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
SNX1-204ENST00000559061 SMDT1Q9H4I9 107 aa7.87□□□□□ -1.15
SNX1-204ENST00000559061 V9GYV3 84 aa7.87□□□□□ -1.15
SNX1-204ENST00000559061 EPPK1P58107 5090 aaKnown RBP7.86□□□□□ -1.15
SNX1-204ENST00000559061 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
SNX1-204ENST00000559061 ADCYAP1P18509 176 aa7.86□□□□□ -1.15
SNX1-204ENST00000559061 RPS20P60866 119 aaKnown RBP7.86□□□□□ -1.15
SNX1-204ENST00000559061 RNF212Q495C1 297 aa7.86□□□□□ -1.15
SNX1-204ENST00000559061 LYZL1Q6UWQ5 148 aa7.86□□□□□ -1.15
SNX1-204ENST00000559061 DAZAP1Q96EP5 407 aaKnown RBP7.86□□□□□ -1.15
SNX1-204ENST00000559061 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
SNX1-204ENST00000559061 ICOSQ9Y6W8 199 aa7.86□□□□□ -1.15
SNX1-204ENST00000559061 SSTP61278 116 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 SLAQ13239 276 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 TMEM241Q24JQ0 296 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 FAM74A3Q4VXF1 159 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 Q6ZR54 194 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 OSTCQ9NRP0 149 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 NAT8Q9UHE5 227 aa7.85□□□□□ -1.15
SNX1-204ENST00000559061 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
SNX1-204ENST00000559061 CIDEAO60543 219 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 ERVFC1-1P60608 527 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 RAB14P61106 215 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 CT83Q5H943 113 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 FAM74A4Q5TZK3 123 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 LYPD5Q6UWN5 251 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 UPK3BQ9BT76 320 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 TPPP3Q9BW30 176 aa7.84□□□□□ -1.15
SNX1-204ENST00000559061 MRPS16Q9Y3D3 137 aaKnown RBP7.84□□□□□ -1.15
SNX1-204ENST00000559061 IGLV2-18A0A075B6J9 118 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 RHODO00212 210 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 FOXA3P55318 350 aaPredicted RBP7.83□□□□□ -1.16
SNX1-204ENST00000559061 RHOHQ15669 191 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 ADIRFQ15847 76 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 MRPL23Q16540 153 aaKnown RBP7.83□□□□□ -1.16
SNX1-204ENST00000559061 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 SPANXN1Q5VSR9 72 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
SNX1-204ENST00000559061 A0A1W2PPQ1 181 aa7.82□□□□□ -1.16
SNX1-204ENST00000559061 NTF3P20783 257 aa7.82□□□□□ -1.16
SNX1-204ENST00000559061 EVI2AP22794 236 aa7.82□□□□□ -1.16
SNX1-204ENST00000559061 CACNG7P62955 275 aa7.82□□□□□ -1.16
SNX1-204ENST00000559061 TSKUQ8WUA8 353 aa7.82□□□□□ -1.16
SNX1-204ENST00000559061 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
SNX1-204ENST00000559061 XKRY2A2RUG3 117 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 LINC00862A6NCI5 91 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 F2Z2F3 143 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 M0R2N4 97 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 SRIP30626 198 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 CCL18P55774 89 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 FAM3BP58499 235 aaPredicted RBP7.81□□□□□ -1.16
SNX1-204ENST00000559061 WDR73Q6P4I2 378 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 AP1S3Q96PC3 154 aa7.81□□□□□ -1.16
SNX1-204ENST00000559061 GAGE12JA6NER3 117 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 HIGD1CA8MV81 97 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 A8MWL6 223 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 TIRAPP58753 221 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 RAB4BP61018 213 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 GAGE1Q13065 139 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 GAGE4Q13068 117 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 GAGE5Q13069 117 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 GAGE13Q4V321 117 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 WFDC10BQ8IUB3 73 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 OR10G8Q8NGN5 311 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 PRADC1Q9BSG0 188 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
SNX1-204ENST00000559061 SMIM27A0A1W2PRY6 76 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 M0QY20 66 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 RTL8CO15255 209 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 UBE2D3P61077 147 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 UBE2D2P62837 147 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 ZNF56Q15929 161 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 Q8N3U1 123 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 NUP35Q8NFH5 326 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 Q9H8V8 135 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 PKD1P98161 4303 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
SNX1-204ENST00000559061 NBDYA0A0U1RRE5 68 aa7.78□□□□□ -1.16
SNX1-204ENST00000559061 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
SNX1-204ENST00000559061 FAM231BA6NCW3 169 aa7.78□□□□□ -1.16
SNX1-204ENST00000559061 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
SNX1-204ENST00000559061 UQCC3Q6UW78 93 aa7.78□□□□□ -1.16
SNX1-204ENST00000559061 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 MGPP08493 103 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 TWIST1Q15672 202 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 ATP6V0E2Q8NHE4 81 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 RNF185Q96GF1 192 aa7.77□□□□□ -1.17
SNX1-204ENST00000559061 DPH3P1Q9H4G8 78 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms