RNA–Protein interactions for RNA: ENST00000558955.2

PKNOX1-208, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-208ENST00000558955 GAGE4Q13068 117 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 GAGE5Q13069 117 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 GAGE13Q4V321 117 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 CENPWQ5EE01 88 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 ZFP82Q8N141 532 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 SFRP2Q96HF1 295 aa8.46□□□□□ -1.06
PKNOX1-208ENST00000558955 KIAA1109Q2LD37 5005 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 MUC21A0A0G2JKD1 596 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 MUC21A0A140T8X8 626 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 RHODO00212 210 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 IGLV2-8P01709 118 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 LINC00694P0DN24 101 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 BCL2P10415 239 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 MEF2BQ02080 365 aaPredicted RBP8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 OR10J3Q5JRS4 329 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 OR10AG1Q8NH19 301 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 GTSF1LQ9H1H1 148 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 HERC2O95714 4834 aa8.45□□□□□ -1.06
PKNOX1-208ENST00000558955 PDE6DO43924 150 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 IFNA1P01562 189 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 CXCL1P09341 107 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 NKX2-5P52952 324 aaPredicted RBP8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 LELP1Q5T871 98 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 ALKAL2Q6UX46 152 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 VAX2Q9UIW0 290 aa8.44□□□□□ -1.06
PKNOX1-208ENST00000558955 TRBV20OR9-2A0A075B6H5 130 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 SNAI2O43623 268 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 GNG4P50150 75 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 SSTP61278 116 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
PKNOX1-208ENST00000558955 K7EP13 123 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 OR5AL1P0C617 328 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 IGHV3-30-3P0DP02 117 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 GZMBP10144 247 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 Q8N3U1 123 aa8.42□□□□□ -1.06
PKNOX1-208ENST00000558955 C19orf71A6NCJ1 209 aa8.41□□□□□ -1.06
PKNOX1-208ENST00000558955 FUSP35637 526 aaKnown RBP eCLIP8.41□□□□□ -1.06
PKNOX1-208ENST00000558955 SPANXN1Q5VSR9 72 aa8.41□□□□□ -1.06
PKNOX1-208ENST00000558955 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
PKNOX1-208ENST00000558955 DAZAP1Q96EP5 407 aaKnown RBP8.41□□□□□ -1.06
PKNOX1-208ENST00000558955 RBFOX3A6NFN3 312 aa8.4□□□□□ -1.06
PKNOX1-208ENST00000558955 OR2D3Q8NGH3 330 aa8.4□□□□□ -1.06
PKNOX1-208ENST00000558955 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
PKNOX1-208ENST00000558955 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 TAGLN2P37802 199 aaKnown RBP8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 RAB4BP61018 213 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 BLOC1S1P78537 153 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 ZNF56Q15929 161 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 TPPP3Q9BW30 176 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 Q9HAA7 133 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
PKNOX1-208ENST00000558955 A0A087WTM6 91 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 P01737 135 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 IGLC6P0CF74 106 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 RPS20P60866 119 aaKnown RBP8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 RPL36AP83881 106 aaKnown RBP8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 LYPD6BQ8NI32 183 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 RPL36ALQ969Q0 106 aaKnown RBP8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
PKNOX1-208ENST00000558955 TRBV7-3A0A075B6L6 115 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 A0A087WWC5 75 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 K7EN84 100 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 EREGO14944 169 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 UBE2D3P61077 147 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 UBE2D2P62837 147 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 NEXN-AS1Q8NBZ9 246 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 NUDT10Q8NFP7 164 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 BIN3Q9NQY0 253 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
PKNOX1-208ENST00000558955 F5H697 171 aa8.36□□□□□ -1.07
PKNOX1-208ENST00000558955 DAZ4Q86SG3 579 aaKnown RBP8.36□□□□□ -1.07
PKNOX1-208ENST00000558955 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
PKNOX1-208ENST00000558955 OCC1Q8TAD7 63 aa8.36□□□□□ -1.07
PKNOX1-208ENST00000558955 AP1S3Q96PC3 154 aa8.36□□□□□ -1.07
PKNOX1-208ENST00000558955 DAZ3Q9NR90 486 aaKnown RBP8.36□□□□□ -1.07
PKNOX1-208ENST00000558955 XKRY2A2RUG3 117 aa8.35□□□□□ -1.07
PKNOX1-208ENST00000558955 PSCAO43653 123 aa8.35□□□□□ -1.07
PKNOX1-208ENST00000558955 SMIM17P0DL12 118 aa8.35□□□□□ -1.07
PKNOX1-208ENST00000558955 TOR2AQ5JU69 321 aa8.35□□□□□ -1.07
PKNOX1-208ENST00000558955 LYZL1Q6UWQ5 148 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms