RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 SMIM9A6NGZ8 99 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 C11orf94C9JXX5 98 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 NDUFS6O75380 124 aaKnown RBP4.19□□□□□ -1.74
LRRC28-209ENST00000558861 LTAP01374 205 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 IGLV2-8P01709 118 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 MIFP14174 115 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 GATA1P15976 413 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-209ENST00000558861 AZU1P20160 251 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 LEPP41159 167 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 CRIP1P50238 77 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 TAS2R60P59551 318 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 FLI1Q01543 452 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-209ENST00000558861 MEF2BQ02080 365 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-209ENST00000558861 TDRG1Q3Y452 100 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM78Q5T7P6 136 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 C11orf72Q8NBR9 251 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 CMTM2Q8TAZ6 248 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 TXNDC17Q9BRA2 123 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 DERL1Q9BUN8 251 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 MUC4Q99102 2169 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 DNAH17Q9UFH2 4485 aa4.19□□□□□ -1.74
LRRC28-209ENST00000558861 TRAV12-3A0A0B4J271 114 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 FBLL1A6NHQ2 334 aaKnown RBP4.18□□□□□ -1.74
LRRC28-209ENST00000558861 ZNF705GA8MUZ8 300 aaPredicted RBP4.18□□□□□ -1.74
LRRC28-209ENST00000558861 C9JQL5 133 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 H7BYZ3 331 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 DEFB4AO15263 64 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 RNASE4P34096 147 aaKnown RBP4.18□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM183BQ1AE95 376 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 ZNF506Q5JVG8 444 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM256Q8N2U0 113 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 LINC00612Q8N6U2 182 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 FMC1Q96HJ9 113 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 FAM210AQ96ND0 272 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 TREM1Q9NP99 234 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 VAX2Q9UIW0 290 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 TP53TG3Q9ULZ0 132 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 RPH3ALQ9UNE2 315 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 CELA1Q9UNI1 258 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 GOLT1BQ9Y3E0 138 aa4.18□□□□□ -1.74
LRRC28-209ENST00000558861 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 F6UZH7 168 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 IFNA7P01567 189 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 GPX1P07203 203 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 TAGLN2P37802 199 aaKnown RBP4.17□□□□□ -1.74
LRRC28-209ENST00000558861 RPL35P42766 123 aaKnown RBP4.17□□□□□ -1.74
LRRC28-209ENST00000558861 PRNTQ86SH4 94 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 PYGO2Q9BRQ0 406 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 ZFP30Q9Y2G7 519 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
LRRC28-209ENST00000558861 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 IGHV1OR15-1A0A075B7D0 117 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 TRAV21A0A0B4J279 112 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 RBFOX3A6NFN3 312 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM250H0YL14 139 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 TEX46H3BTG2 121 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 PDE6DO43924 150 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 GCGP01275 180 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 PFN1P07737 140 aaKnown RBP4.16□□□□□ -1.74
LRRC28-209ENST00000558861 SRP19P09132 144 aaKnown RBP4.16□□□□□ -1.74
LRRC28-209ENST00000558861 AKR1C3P42330 323 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 DAZ2Q13117 558 aaKnown RBP4.16□□□□□ -1.74
LRRC28-209ENST00000558861 RRN3P1Q2M238 152 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 SMUG1Q53HV7 270 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 SAPCD1Q5SSQ6 148 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 ZNF493Q6ZR52 646 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM183AQ8IXX5 376 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 TMEM263Q8WUH6 116 aaKnown RBP4.16□□□□□ -1.74
LRRC28-209ENST00000558861 LINC01587Q99440 93 aa4.16□□□□□ -1.74
LRRC28-209ENST00000558861 DNAH11Q96DT5 4516 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 RAB19A4D1S5 217 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 TMEM189A5PLL7 270 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 C19orf71A6NCJ1 209 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 C9JCJ5 164 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 K7EN84 100 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 K7EQM0 130 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 IFNA1P01562 189 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 S100A9P06702 114 aaKnown RBP4.15□□□□□ -1.75
LRRC28-209ENST00000558861 TCL1AP56279 114 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.75
LRRC28-209ENST00000558861 CENPWQ5EE01 88 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 CLLU1Q5K131 121 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 DNLZQ5SXM8 178 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 IBA57Q5T440 356 aaKnown RBP4.15□□□□□ -1.75
LRRC28-209ENST00000558861 FAM222AQ5U5X8 452 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 FAM159AQ6UWV7 190 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 ZNF767PQ75MW2 155 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 EIF4E3Q8N5X7 224 aaKnown RBP4.15□□□□□ -1.75
LRRC28-209ENST00000558861 MUC7Q8TAX7 377 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 C16orf74Q96GX8 76 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 C9orf85Q96MD7 179 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 C18orf15Q96N68 181 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 NIPSNAP3BQ9BS92 247 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 TMEM208Q9BTX3 173 aa4.15□□□□□ -1.75
LRRC28-209ENST00000558861 FABP5P3A8MUU1 101 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 KRBOX1C9JBD0 128 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms