RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 SSTP61278 116 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 GTSF1LQ9H1H1 148 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 Q9UF83 564 aa10.37□□□□□ -0.75
RPL28-207ENST00000558815 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
RPL28-207ENST00000558815 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
RPL28-207ENST00000558815 RAB19A4D1S5 217 aa10.36□□□□□ -0.75
RPL28-207ENST00000558815 MEF2BQ02080 365 aaPredicted RBP10.36□□□□□ -0.75
RPL28-207ENST00000558815 LELP1Q5T871 98 aa10.36□□□□□ -0.75
RPL28-207ENST00000558815 UFSP1Q6NVU6 142 aa10.36□□□□□ -0.75
RPL28-207ENST00000558815 OR10AG1Q8NH19 301 aa10.36□□□□□ -0.75
RPL28-207ENST00000558815 KRTAP10-2P60368 255 aa10.35□□□□□ -0.75
RPL28-207ENST00000558815 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
RPL28-207ENST00000558815 C10orf126Q8N4M7 172 aa10.35□□□□□ -0.75
RPL28-207ENST00000558815 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
RPL28-207ENST00000558815 EREGO14944 169 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 PDE6DO43924 150 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 BCL2P10415 239 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
RPL28-207ENST00000558815 GNG4P50150 75 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 DAZAP1Q96EP5 407 aaKnown RBP10.34□□□□□ -0.75
RPL28-207ENST00000558815 Q9HAA7 133 aa10.34□□□□□ -0.75
RPL28-207ENST00000558815 K7EP13 123 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 CXCL1P09341 107 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 ZNF56Q15929 161 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 LINC01556Q5JQF7 62 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 TPPP3Q9BW30 176 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 VAX2Q9UIW0 290 aa10.33□□□□□ -0.76
RPL28-207ENST00000558815 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
RPL28-207ENST00000558815 GZMBP10144 247 aa10.32□□□□□ -0.76
RPL28-207ENST00000558815 Q8N3U1 123 aa10.32□□□□□ -0.76
RPL28-207ENST00000558815 OR2D3Q8NGH3 330 aa10.32□□□□□ -0.76
RPL28-207ENST00000558815 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
RPL28-207ENST00000558815 SNAI2O43623 268 aa10.31□□□□□ -0.76
RPL28-207ENST00000558815 PSCAO43653 123 aa10.31□□□□□ -0.76
RPL28-207ENST00000558815 OR5AL1P0C617 328 aa10.31□□□□□ -0.76
RPL28-207ENST00000558815 NKX2-5P52952 324 aaPredicted RBP10.31□□□□□ -0.76
RPL28-207ENST00000558815 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
RPL28-207ENST00000558815 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
RPL28-207ENST00000558815 A0A087WTM6 91 aa10.3□□□□□ -0.76
RPL28-207ENST00000558815 RBFOX3A6NFN3 312 aa10.3□□□□□ -0.76
RPL28-207ENST00000558815 F5H697 171 aa10.3□□□□□ -0.76
RPL28-207ENST00000558815 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
RPL28-207ENST00000558815 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
RPL28-207ENST00000558815 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
RPL28-207ENST00000558815 A0A087WWC5 75 aa10.29□□□□□ -0.76
RPL28-207ENST00000558815 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
RPL28-207ENST00000558815 P01737 135 aa10.29□□□□□ -0.76
RPL28-207ENST00000558815 SMIM17P0DL12 118 aa10.29□□□□□ -0.76
RPL28-207ENST00000558815 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
RPL28-207ENST00000558815 DNAH5Q8TE73 4624 aa10.29□□□□□ -0.76
RPL28-207ENST00000558815 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 TAGLN2P37802 199 aaKnown RBP10.28□□□□□ -0.76
RPL28-207ENST00000558815 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
RPL28-207ENST00000558815 RAB4BP61018 213 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 AP1S3Q96PC3 154 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 RYR1P21817 5038 aa10.28□□□□□ -0.76
RPL28-207ENST00000558815 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
RPL28-207ENST00000558815 TRBV10-1A0A0K0K1A3 114 aa10.27□□□□□ -0.77
RPL28-207ENST00000558815 MGPP08493 103 aa10.27□□□□□ -0.77
RPL28-207ENST00000558815 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
RPL28-207ENST00000558815 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
RPL28-207ENST00000558815 URGCP-MRPS24S4R325 110 aa10.27□□□□□ -0.77
RPL28-207ENST00000558815 IGLC6P0CF74 106 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 CEBPGP53567 150 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 UBE2D3P61077 147 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 UBE2D2P62837 147 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 BIN3Q9NQY0 253 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
RPL28-207ENST00000558815 XKRY2A2RUG3 117 aa10.25□□□□□ -0.77
RPL28-207ENST00000558815 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
RPL28-207ENST00000558815 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
RPL28-207ENST00000558815 HSPG2P98160 4391 aa10.25□□□□□ -0.77
RPL28-207ENST00000558815 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
RPL28-207ENST00000558815 CACNG7P62955 275 aa10.24□□□□□ -0.77
RPL28-207ENST00000558815 TOR2AQ5JU69 321 aa10.24□□□□□ -0.77
RPL28-207ENST00000558815 OR10G8Q8NGN5 311 aa10.24□□□□□ -0.77
RPL28-207ENST00000558815 OCC1Q8TAD7 63 aa10.24□□□□□ -0.77
RPL28-207ENST00000558815 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
RPL28-207ENST00000558815 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
RPL28-207ENST00000558815 A0A087WX48 190 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 LAGE3Q14657 143 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 KCNIP4Q6PIL6 250 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 NIT1Q86X76 327 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
RPL28-207ENST00000558815 KIF25-AS1Q9Y6Z4 181 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms