RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 GAGE1Q13065 139 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 GAGE4Q13068 117 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 GAGE5Q13069 117 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 Q8N9P0 234 aaPredicted RBP6.29□□□□□ -1.4
SPG11-212ENST00000558790 SGK494Q96LW2 274 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 MBD2Q9UBB5 411 aa6.29□□□□□ -1.4
SPG11-212ENST00000558790 GGTLC3B5MD39 225 aa6.28□□□□□ -1.4
SPG11-212ENST00000558790 RNASE3P12724 160 aaKnown RBP6.28□□□□□ -1.4
SPG11-212ENST00000558790 ASAH1Q13510 395 aa6.28□□□□□ -1.4
SPG11-212ENST00000558790 FAM74A1Q5RGS3 127 aa6.28□□□□□ -1.4
SPG11-212ENST00000558790 PARLQ9H300 379 aa6.28□□□□□ -1.4
SPG11-212ENST00000558790 Q9UF83 564 aa6.28□□□□□ -1.4
SPG11-212ENST00000558790 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
SPG11-212ENST00000558790 GCGP01275 180 aa6.27□□□□□ -1.41
SPG11-212ENST00000558790 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
SPG11-212ENST00000558790 HNRNPA3P51991 378 aaKnown RBP6.27□□□□□ -1.41
SPG11-212ENST00000558790 NDFIP1Q9BT67 221 aa6.27□□□□□ -1.41
SPG11-212ENST00000558790 SMIM3Q9BZL3 60 aa6.27□□□□□ -1.41
SPG11-212ENST00000558790 FAM240BA0A1B0GVZ2 78 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 RNF222A6NCQ9 220 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 HMGB3O15347 200 aaKnown RBP6.26□□□□□ -1.41
SPG11-212ENST00000558790 RAB2AP61019 212 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 PQLC2Q6ZP29 291 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 ARL6IP6Q8N6S5 226 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 C14orf178Q8N769 122 aaPredicted RBP6.26□□□□□ -1.41
SPG11-212ENST00000558790 CYB561D1Q8N8Q1 229 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 Q8N976 141 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 PTH2Q96A98 100 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 RMI2Q96E14 147 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 SAMD10Q9BYL1 202 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 HSPB11Q9Y547 144 aa6.26□□□□□ -1.41
SPG11-212ENST00000558790 MUC2Q02817 5179 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 A0A087WWC5 75 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 TAAR5O14804 337 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 IGLV2-11P01706 119 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 ARL14EPLP0DKL9 152 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 AMTP48728 403 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 H2BFSP57053 126 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 RPL37AP61513 92 aaKnown RBP6.25□□□□□ -1.41
SPG11-212ENST00000558790 ACOT6Q3I5F7 207 aaPredicted RBP6.25□□□□□ -1.41
SPG11-212ENST00000558790 ZFP69Q49AA0 526 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 UFSP1Q6NVU6 142 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 ZFP2Q6ZN57 461 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 NIT1Q86X76 327 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 OR2T35Q8NGX2 323 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 LINC00479Q96M42 142 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 SH3BGRL3Q9H299 93 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 JPT2Q9H910 190 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 KLK12Q9UKR0 248 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 URGCP-MRPS24S4R325 110 aa6.25□□□□□ -1.41
SPG11-212ENST00000558790 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 A0A1W2PPV4 95 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 A8MWV9 139 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 TCRAP04437 139 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 LGALSLQ3ZCW2 172 aaPredicted RBP6.24□□□□□ -1.41
SPG11-212ENST00000558790 ATRAIDQ6UW56 229 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 SCGB1C1Q8TD33 95 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 PPP1R1CQ8WVI7 109 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 UBE2WQ96B02 151 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 CCDC32Q9BV29 185 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 PSG8Q9UQ74 426 aa6.24□□□□□ -1.41
SPG11-212ENST00000558790 IGKV3D-20A0A0C4DH25 116 aa6.23□□□□□ -1.41
SPG11-212ENST00000558790 SMUG1Q53HV7 270 aa6.23□□□□□ -1.41
SPG11-212ENST00000558790 PRNTQ86SH4 94 aa6.23□□□□□ -1.41
SPG11-212ENST00000558790 WFDC1Q9HC57 220 aa6.23□□□□□ -1.41
SPG11-212ENST00000558790 LPAP08519 4548 aa6.23□□□□□ -1.41
SPG11-212ENST00000558790 H3BVH4 76 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 K7EQM0 130 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 MPC2O95563 127 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 SEC11BP0C7V7 166 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 PET100P0DJ07 73 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 S100A4P26447 101 aaKnown RBP6.22□□□□□ -1.41
SPG11-212ENST00000558790 RPL12P30050 165 aaKnown RBP6.22□□□□□ -1.41
SPG11-212ENST00000558790 CDC34P49427 236 aaPredicted RBP6.22□□□□□ -1.41
SPG11-212ENST00000558790 FGF8P55075 233 aaPredicted RBP6.22□□□□□ -1.41
SPG11-212ENST00000558790 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
SPG11-212ENST00000558790 FLI1Q01543 452 aaPredicted RBP6.22□□□□□ -1.41
SPG11-212ENST00000558790 FAM74A4Q5TZK3 123 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 MZT2BQ6NZ67 158 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 OR10G9Q8NGN4 311 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 OR10G7Q8NGN6 311 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 ENKURQ8TC29 256 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 PAM16Q9Y3D7 125 aa6.22□□□□□ -1.41
SPG11-212ENST00000558790 A0A087WX48 190 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 PAGE4O60829 102 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 STAG3L2P0CL84 134 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 STAG3L3P0CL85 134 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 GCHFRP30047 84 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 C14orf177Q52M58 125 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 SUN5Q8TC36 379 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 CHCHD7Q9BUK0 85 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 IL36BQ9NZH7 164 aa6.21□□□□□ -1.42
SPG11-212ENST00000558790 HLA-DQA1P01909 254 aa6.2□□□□□ -1.42
SPG11-212ENST00000558790 OR2G3Q8NGZ4 309 aa6.2□□□□□ -1.42
SPG11-212ENST00000558790 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
SPG11-212ENST00000558790 ARL2-SNX15V9GYD0 113 aa6.2□□□□□ -1.42
SPG11-212ENST00000558790 TRAV34A0A0B4J273 112 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms