RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 SULT1A1P50225 295 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 FGF8P55075 233 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-208ENST00000558771 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 CIRBPQ14011 172 aaKnown RBP3.43□□□□□ -1.86
LRRC28-208ENST00000558771 ELOBQ15370 118 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 ENHOQ6UWT2 76 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 C14orf178Q8N769 122 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-208ENST00000558771 OR2T35Q8NGX2 323 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 DEDD2Q8WXF8 326 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 HYLS1Q96M11 299 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 BCL7BQ9BQE9 202 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 CHCHD7Q9BUK0 85 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 SLIRPQ9GZT3 109 aaKnown RBP3.43□□□□□ -1.86
LRRC28-208ENST00000558771 PARLQ9H300 379 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 TREM1Q9NP99 234 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 A0A087WYN8 130 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 PGPA6NDG6 321 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 CHTF8P0CG12 524 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 RNASE3P12724 160 aaKnown RBP3.42□□□□□ -1.86
LRRC28-208ENST00000558771 ZNF80P51504 273 aaPredicted RBP3.42□□□□□ -1.86
LRRC28-208ENST00000558771 UBE2L3P68036 154 aaKnown RBP3.42□□□□□ -1.86
LRRC28-208ENST00000558771 HBG1P69891 147 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 HBG2P69892 147 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 RPL19P84098 196 aaKnown RBP3.42□□□□□ -1.86
LRRC28-208ENST00000558771 ATP6V1FQ16864 119 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 SPANXN2Q5MJ10 180 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 UFSP1Q6NVU6 142 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 WDR73Q6P4I2 378 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 ZFP2Q6ZN57 461 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 GOLT1AQ6ZVE7 132 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 TMEM252Q8N6L7 170 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 ARL6IP6Q8N6S5 226 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 TMEM75Q8N9X5 138 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 THAP6Q8TBB0 222 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 MITD1Q8WV92 249 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 PTH2Q96A98 100 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 NMES1Q9C002 83 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 JPT2Q9H910 190 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
LRRC28-208ENST00000558771 KIF25-AS1Q9Y6Z4 181 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 V9GYH0 126 aa3.42□□□□□ -1.86
LRRC28-208ENST00000558771 A8MWV9 139 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 FAM25EA8MYX2 175 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 TMEM262E9PQX1 116 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 PAGE4O60829 102 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 CRPP02741 224 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 PVALBP20472 110 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-208ENST00000558771 LGALSLQ3ZCW2 172 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-208ENST00000558771 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 STX12Q86Y82 276 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 C15orf54Q8N8G6 183 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 CMTM2Q8TAZ6 248 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 C7orf33Q8WU49 177 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 DPH3Q96FX2 82 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 RNF185Q96GF1 192 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 SGK494Q96LW2 274 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 OTORQ9NRC9 128 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
LRRC28-208ENST00000558771 NAP1L6A6NFF2 107 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 TAAR5O14804 337 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 EIF3GO75821 320 aaKnown RBP eCLIP3.4□□□□□ -1.87
LRRC28-208ENST00000558771 GCGP01275 180 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 ANGP03950 147 aaKnown RBP3.4□□□□□ -1.87
LRRC28-208ENST00000558771 BTCP35070 178 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 AMTP48728 403 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 S100A10P60903 97 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 CNBPP62633 177 aaKnown RBP3.4□□□□□ -1.87
LRRC28-208ENST00000558771 GNG5P63218 68 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
LRRC28-208ENST00000558771 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 FAM74A1Q5RGS3 127 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 KRTAP26-1Q6PEX3 210 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 OR10G7Q8NGN6 311 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 SPACA4Q8TDM5 124 aa3.4□□□□□ -1.87
LRRC28-208ENST00000558771 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 IGHV3-64A0A075B6Q5 118 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 S100A4P26447 101 aaKnown RBP3.39□□□□□ -1.87
LRRC28-208ENST00000558771 TMBIM6P55061 237 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 TAS2R45P59539 299 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 UBE2D3P61077 147 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 UBE2D2P62837 147 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 IL15RAQ13261 267 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 MIAQ16674 131 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 KHDC3LQ587J8 217 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 FAM74A4Q5TZK3 123 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 REG3GQ6UW15 175 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 GTSF1Q8WW33 167 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 NDFIP1Q9BT67 221 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 MRPS26Q9BYN8 205 aaKnown RBP3.39□□□□□ -1.87
LRRC28-208ENST00000558771 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
LRRC28-208ENST00000558771 PLAC8Q9NZF1 115 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 OR5AC2Q9NZP5 309 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 MBD2Q9UBB5 411 aa3.39□□□□□ -1.87
LRRC28-208ENST00000558771 TRBV6-8A0A0A6YYG3 113 aa3.38□□□□□ -1.87
LRRC28-208ENST00000558771 IGKV3D-20A0A0C4DH25 116 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms