RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 GYPEP15421 78 aa11.62□□□□□ -0.55
PBX4-202ENST00000557978 SRIP30626 198 aa11.62□□□□□ -0.55
PBX4-202ENST00000557978 CACNG7P62955 275 aa11.62□□□□□ -0.55
PBX4-202ENST00000557978 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
PBX4-202ENST00000557978 SLC25A29Q8N8R3 303 aa11.62□□□□□ -0.55
PBX4-202ENST00000557978 K7EQD1 137 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 CT83Q5H943 113 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 NEGR1Q7Z3B1 354 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 SH2D6Q7Z4S9 175 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 C15orf54Q8N8G6 183 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 SAMD10Q9BYL1 202 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
PBX4-202ENST00000557978 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 CRYGDP07320 174 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 RPL23P62829 140 aaKnown RBP11.6□□□□□ -0.55
PBX4-202ENST00000557978 UFSP1Q6NVU6 142 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 WDR73Q6P4I2 378 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 LYZL1Q6UWQ5 148 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 A0A087WWL8 130 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 SSTP61278 116 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 ADIRFQ15847 76 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 ESRGQ1W209 222 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
PBX4-202ENST00000557978 ISOC2Q96AB3 205 aa11.59□□□□□ -0.55
PBX4-202ENST00000557978 CTRLP40313 264 aa11.58□□□□□ -0.56
PBX4-202ENST00000557978 LOC100131303A0A0U1RQF7 123 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 FAM231BA6NCW3 169 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 NTF3P20783 257 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 RAB4BP61018 213 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 C14orf178Q8N769 122 aaPredicted RBP11.57□□□□□ -0.56
PBX4-202ENST00000557978 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 CNFNQ9BYD5 112 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
PBX4-202ENST00000557978 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
PBX4-202ENST00000557978 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
PBX4-202ENST00000557978 ZNF56Q15929 161 aa11.56□□□□□ -0.56
PBX4-202ENST00000557978 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
PBX4-202ENST00000557978 Q6ZSN1 163 aa11.56□□□□□ -0.56
PBX4-202ENST00000557978 OR10G8Q8NGN5 311 aa11.56□□□□□ -0.56
PBX4-202ENST00000557978 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
PBX4-202ENST00000557978 GTSF1Q8WW33 167 aa11.56□□□□□ -0.56
PBX4-202ENST00000557978 TWIST1Q15672 202 aa11.55□□□□□ -0.56
PBX4-202ENST00000557978 ZNRF2Q8NHG8 242 aa11.55□□□□□ -0.56
PBX4-202ENST00000557978 BORCS7Q96B45 105 aa11.55□□□□□ -0.56
PBX4-202ENST00000557978 MSRB1Q9NZV6 116 aa11.55□□□□□ -0.56
PBX4-202ENST00000557978 TRBV10-1A0A0K0K1A3 114 aa11.54□□□□□ -0.56
PBX4-202ENST00000557978 F5H697 171 aa11.54□□□□□ -0.56
PBX4-202ENST00000557978 Q9H8V8 135 aa11.54□□□□□ -0.56
PBX4-202ENST00000557978 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
PBX4-202ENST00000557978 V9GYV3 84 aa11.54□□□□□ -0.56
PBX4-202ENST00000557978 PNRC1Q12796 327 aaPredicted RBP11.53□□□□□ -0.56
PBX4-202ENST00000557978 SMIM15Q7Z3B0 74 aa11.53□□□□□ -0.56
PBX4-202ENST00000557978 ATP6V0E2Q8NHE4 81 aa11.53□□□□□ -0.56
PBX4-202ENST00000557978 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
PBX4-202ENST00000557978 DPH3P1Q9H4G8 78 aa11.53□□□□□ -0.56
PBX4-202ENST00000557978 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 GAGE12JA6NER3 117 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 HIGD1CA8MV81 97 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 TIRAPP58753 221 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 RPL36AP83881 106 aaKnown RBP11.52□□□□□ -0.56
PBX4-202ENST00000557978 GAGE1Q13065 139 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 GAGE4Q13068 117 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 GAGE5Q13069 117 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 GAGE13Q4V321 117 aa11.52□□□□□ -0.56
PBX4-202ENST00000557978 RPL36ALQ969Q0 106 aaKnown RBP11.52□□□□□ -0.56
PBX4-202ENST00000557978 EVI2AP22794 236 aa11.52□□□□□ -0.57
PBX4-202ENST00000557978 H7C1H1 209 aa11.51□□□□□ -0.57
PBX4-202ENST00000557978 SIVA1O15304 175 aa11.51□□□□□ -0.57
PBX4-202ENST00000557978 MGPP08493 103 aa11.51□□□□□ -0.57
PBX4-202ENST00000557978 LINC00315P59091 139 aa11.51□□□□□ -0.57
PBX4-202ENST00000557978 GTSF1LQ9H1H1 148 aa11.51□□□□□ -0.57
PBX4-202ENST00000557978 NAT8BQ9UHF3 227 aa11.51□□□□□ -0.57
PBX4-202ENST00000557978 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
PBX4-202ENST00000557978 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
PBX4-202ENST00000557978 M0R2N4 97 aa11.5□□□□□ -0.57
PBX4-202ENST00000557978 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
PBX4-202ENST00000557978 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
PBX4-202ENST00000557978 COMMD7Q86VX2 200 aa11.5□□□□□ -0.57
PBX4-202ENST00000557978 NBDYA0A0U1RRE5 68 aa11.49□□□□□ -0.57
PBX4-202ENST00000557978 LINC00862A6NCI5 91 aa11.49□□□□□ -0.57
PBX4-202ENST00000557978 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
PBX4-202ENST00000557978 Q9UF83 564 aa11.49□□□□□ -0.57
PBX4-202ENST00000557978 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 TMEM218A2RU14 115 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 Q6ZR54 194 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 FRAS1Q86XX4 4008 aa11.48□□□□□ -0.57
PBX4-202ENST00000557978 DNAH10Q8IVF4 4471 aa11.47□□□□□ -0.57
PBX4-202ENST00000557978 F8W036 122 aa11.47□□□□□ -0.57
PBX4-202ENST00000557978 RIGQ13278 110 aa11.47□□□□□ -0.57
PBX4-202ENST00000557978 LELP1Q5T871 98 aa11.47□□□□□ -0.57
PBX4-202ENST00000557978 NEXN-AS1Q8NBZ9 246 aa11.47□□□□□ -0.57
PBX4-202ENST00000557978 ANAPC16Q96DE5 110 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms