RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CCL18P55774 89 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
USP3-205ENST00000557884 ADIRFQ15847 76 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 LYZL1Q6UWQ5 148 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 FAM231DQ6ZW35 169 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 NAT8Q9UHE5 227 aa9.94□□□□□ -0.82
USP3-205ENST00000557884 RHODO00212 210 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 CIDEAO60543 219 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 CRYGDP07320 174 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 SRIP30626 198 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
USP3-205ENST00000557884 ESRGQ1W209 222 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 RNF212Q495C1 297 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 LINC00588Q9Y4M8 146 aa9.93□□□□□ -0.82
USP3-205ENST00000557884 A0A1W2PPQ1 181 aa9.92□□□□□ -0.82
USP3-205ENST00000557884 RHOHQ15669 191 aa9.92□□□□□ -0.82
USP3-205ENST00000557884 C14orf178Q8N769 122 aaPredicted RBP9.92□□□□□ -0.82
USP3-205ENST00000557884 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
USP3-205ENST00000557884 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
USP3-205ENST00000557884 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
USP3-205ENST00000557884 MSRB1Q9NZV6 116 aa9.92□□□□□ -0.82
USP3-205ENST00000557884 IGLV2-18A0A075B6J9 118 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 F2Z2F3 143 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 CTRLP40313 264 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 CACNG7P62955 275 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 OSTCQ9NRP0 149 aa9.91□□□□□ -0.82
USP3-205ENST00000557884 A8MWL6 223 aa9.9□□□□□ -0.82
USP3-205ENST00000557884 ZNF56Q15929 161 aa9.9□□□□□ -0.82
USP3-205ENST00000557884 NEGR1Q7Z3B1 354 aa9.9□□□□□ -0.82
USP3-205ENST00000557884 C15orf54Q8N8G6 183 aa9.9□□□□□ -0.82
USP3-205ENST00000557884 PGLYRP4Q96LB8 373 aa9.9□□□□□ -0.82
USP3-205ENST00000557884 Q9UF83 564 aa9.9□□□□□ -0.82
USP3-205ENST00000557884 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 M0R2N4 97 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 SMIM17P0DL12 118 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 GAGE1Q13065 139 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 GAGE4Q13068 117 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 GAGE5Q13069 117 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 CT83Q5H943 113 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 ZNRF2Q8NHG8 242 aa9.89□□□□□ -0.83
USP3-205ENST00000557884 F5H697 171 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 MGPP08493 103 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 NTF3P20783 257 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 TWIST1Q15672 202 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 LYPD5Q6UWN5 251 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 COMMD7Q86VX2 200 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 OR10G8Q8NGN5 311 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 TSKUQ8WUA8 353 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
USP3-205ENST00000557884 V9GYV3 84 aa9.88□□□□□ -0.83
USP3-205ENST00000557884 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
USP3-205ENST00000557884 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
USP3-205ENST00000557884 NACAE9PAV3 2078 aa9.87□□□□□ -0.83
USP3-205ENST00000557884 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
USP3-205ENST00000557884 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 EVI2AP22794 236 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 RAB4BP61018 213 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 WDR73Q6P4I2 378 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 CNFNQ9BYD5 112 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
USP3-205ENST00000557884 LINC00315P59091 139 aa9.85□□□□□ -0.83
USP3-205ENST00000557884 UQCC3Q6UW78 93 aa9.85□□□□□ -0.83
USP3-205ENST00000557884 SH2D6Q7Z4S9 175 aa9.85□□□□□ -0.83
USP3-205ENST00000557884 UPK3BQ9BT76 320 aa9.85□□□□□ -0.83
USP3-205ENST00000557884 Q9H8V8 135 aa9.85□□□□□ -0.83
USP3-205ENST00000557884 LINC00694P0DN24 101 aa9.84□□□□□ -0.83
USP3-205ENST00000557884 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
USP3-205ENST00000557884 BORCS7Q96B45 105 aa9.84□□□□□ -0.83
USP3-205ENST00000557884 GFRA4Q9GZZ7 299 aa9.84□□□□□ -0.83
USP3-205ENST00000557884 A0A1B0GUT8 65 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 TMEM218A2RU14 115 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 LINC00862A6NCI5 91 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 ADCYAP1P18509 176 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 FOXA3P55318 350 aaPredicted RBP9.83□□□□□ -0.84
USP3-205ENST00000557884 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 NUP35Q8NFH5 326 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 DPH3P1Q9H4G8 78 aa9.83□□□□□ -0.84
USP3-205ENST00000557884 TRBV10-1A0A0K0K1A3 114 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 FAM231BA6NCW3 169 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 F8W036 122 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 RPL36AP83881 106 aaKnown RBP9.82□□□□□ -0.84
USP3-205ENST00000557884 SMIM15Q7Z3B0 74 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 RPL36ALQ969Q0 106 aaKnown RBP9.82□□□□□ -0.84
USP3-205ENST00000557884 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
USP3-205ENST00000557884 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
USP3-205ENST00000557884 SMIM27A0A1W2PRY6 76 aa9.81□□□□□ -0.84
USP3-205ENST00000557884 SIVA1O15304 175 aa9.81□□□□□ -0.84
USP3-205ENST00000557884 TIRAPP58753 221 aa9.81□□□□□ -0.84
USP3-205ENST00000557884 PNRC1Q12796 327 aaPredicted RBP9.81□□□□□ -0.84
USP3-205ENST00000557884 OR10J3Q5JRS4 329 aa9.81□□□□□ -0.84
USP3-205ENST00000557884 Q6ZR54 194 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms