RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 COX8CQ7Z4L0 72 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 Q86TA4 180 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 SYT8Q8NBV8 401 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 ZC2HC1AQ96GY0 325 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 SFRP2Q96HF1 295 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 CHAC1Q9BUX1 264 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 KLK12Q9UKR0 248 aa10.43□□□□□ -0.74
SCFD1-224ENST00000557713 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
SCFD1-224ENST00000557713 PEX7O00628 323 aa10.42□□□□□ -0.74
SCFD1-224ENST00000557713 ATRAIDQ6UW56 229 aa10.42□□□□□ -0.74
SCFD1-224ENST00000557713 OR11H4Q8NGC9 324 aa10.42□□□□□ -0.74
SCFD1-224ENST00000557713 CTXND1A0A1B0GTU2 59 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 FAM74A7A6NL05 159 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 M0R036 132 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 SH2D1AO60880 128 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 UBE2G2P60604 165 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 RPL7L1Q6DKI1 246 aaKnown RBP10.41□□□□□ -0.74
SCFD1-224ENST00000557713 CIRBP-AS1Q8TBR5 109 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 HIST1H2BAQ96A08 127 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 CHCHD7Q9BUK0 85 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 NKX6-2Q9C056 277 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-224ENST00000557713 ZFP30Q9Y2G7 519 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 FAT3Q8TDW7 4589 aa10.41□□□□□ -0.74
SCFD1-224ENST00000557713 A0A087WWL8 130 aa10.4□□□□□ -0.74
SCFD1-224ENST00000557713 ELOBQ15370 118 aa10.4□□□□□ -0.74
SCFD1-224ENST00000557713 HMCN2Q8NDA2 5059 aa10.4□□□□□ -0.74
SCFD1-224ENST00000557713 A0A087WX48 190 aa10.39□□□□□ -0.75
SCFD1-224ENST00000557713 UBE2D3P61077 147 aa10.39□□□□□ -0.75
SCFD1-224ENST00000557713 UBE2D2P62837 147 aa10.39□□□□□ -0.75
SCFD1-224ENST00000557713 MED28Q9H204 178 aa10.39□□□□□ -0.75
SCFD1-224ENST00000557713 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
SCFD1-224ENST00000557713 TRBV10-1A0A0K0K1A3 114 aa10.38□□□□□ -0.75
SCFD1-224ENST00000557713 M0R381 172 aa10.38□□□□□ -0.75
SCFD1-224ENST00000557713 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
SCFD1-224ENST00000557713 ZNF674Q2M3X9 581 aa10.38□□□□□ -0.75
SCFD1-224ENST00000557713 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
SCFD1-224ENST00000557713 FAM162BQ5T6X4 162 aa10.38□□□□□ -0.75
SCFD1-224ENST00000557713 SERTAD4-AS1Q5TG53 156 aa10.38□□□□□ -0.75
SCFD1-224ENST00000557713 TRBV7-3A0A075B6L6 115 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 TRBV6-1A0A0K0K1D8 114 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 OXTP01178 125 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 RPL36AP83881 106 aaKnown RBP10.37□□□□□ -0.75
SCFD1-224ENST00000557713 Q0VG73 95 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 ENHOQ6UWT2 76 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 INO80EQ8NBZ0 244 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-224ENST00000557713 RPL36ALQ969Q0 106 aaKnown RBP10.37□□□□□ -0.75
SCFD1-224ENST00000557713 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
SCFD1-224ENST00000557713 TMSB15BA0A087X1C1 80 aa10.36□□□□□ -0.75
SCFD1-224ENST00000557713 IGLV2-8P01709 118 aa10.36□□□□□ -0.75
SCFD1-224ENST00000557713 GIPP09681 153 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-224ENST00000557713 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
SCFD1-224ENST00000557713 ZFP82Q8N141 532 aa10.36□□□□□ -0.75
SCFD1-224ENST00000557713 OR10G8Q8NGN5 311 aa10.36□□□□□ -0.75
SCFD1-224ENST00000557713 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
SCFD1-224ENST00000557713 LTAP01374 205 aa10.35□□□□□ -0.75
SCFD1-224ENST00000557713 UBE2G1P62253 170 aa10.35□□□□□ -0.75
SCFD1-224ENST00000557713 PKHD1L1Q86WI1 4243 aa10.34□□□□□ -0.75
SCFD1-224ENST00000557713 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
SCFD1-224ENST00000557713 C14orf177Q52M58 125 aa10.34□□□□□ -0.75
SCFD1-224ENST00000557713 AKR1C8PQ5T2L2 129 aa10.34□□□□□ -0.75
SCFD1-224ENST00000557713 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
SCFD1-224ENST00000557713 PTTG1O95997 202 aa10.33□□□□□ -0.76
SCFD1-224ENST00000557713 FHITP49789 147 aa10.33□□□□□ -0.76
SCFD1-224ENST00000557713 RAB4BP61018 213 aa10.33□□□□□ -0.76
SCFD1-224ENST00000557713 PRR27Q6MZM9 219 aa10.33□□□□□ -0.76
SCFD1-224ENST00000557713 TCEAL7Q9BRU2 100 aa10.33□□□□□ -0.76
SCFD1-224ENST00000557713 FXYD6-FXYD2A0A087WZ82 144 aa10.32□□□□□ -0.76
SCFD1-224ENST00000557713 MAP1LC3B2A6NCE7 125 aa10.32□□□□□ -0.76
SCFD1-224ENST00000557713 MPV17L2Q567V2 206 aa10.32□□□□□ -0.76
SCFD1-224ENST00000557713 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
SCFD1-224ENST00000557713 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
SCFD1-224ENST00000557713 MAP1LC3BQ9GZQ8 125 aa10.32□□□□□ -0.76
SCFD1-224ENST00000557713 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
SCFD1-224ENST00000557713 UBR4Q5T4S7 5183 aa10.3□□□□□ -0.76
SCFD1-224ENST00000557713 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
SCFD1-224ENST00000557713 CRPP02741 224 aa10.3□□□□□ -0.76
SCFD1-224ENST00000557713 CST9LP1Q5W188 147 aa10.3□□□□□ -0.76
SCFD1-224ENST00000557713 OR10AG1Q8NH19 301 aa10.3□□□□□ -0.76
SCFD1-224ENST00000557713 G3V3Q6 166 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
SCFD1-224ENST00000557713 PRSS1P07477 247 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 CXCL1P09341 107 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 AKR1C3P42330 323 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 RPL19P84098 196 aaKnown RBP10.29□□□□□ -0.76
SCFD1-224ENST00000557713 ZNF56Q15929 161 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 MIAQ16674 131 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 DGAT2L7PQ6IED9 249 aa10.29□□□□□ -0.76
SCFD1-224ENST00000557713 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-224ENST00000557713 SNAI2O43623 268 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 PAGE4O60829 102 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 HNRNPA3P51991 378 aaKnown RBP10.28□□□□□ -0.76
SCFD1-224ENST00000557713 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
SCFD1-224ENST00000557713 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 NTM-AS1Q6ZSK4 140 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 DAZAP1Q96EP5 407 aaKnown RBP10.28□□□□□ -0.76
SCFD1-224ENST00000557713 CHCHD5Q9BSY4 110 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms