RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.78
RIPK3-206ENST00000557624 RNF151Q2KHN1 245 aa10.21□□□□□ -0.78
RIPK3-206ENST00000557624 Q8N976 141 aa10.21□□□□□ -0.78
RIPK3-206ENST00000557624 KCNS1Q96KK3 526 aa10.21□□□□□ -0.78
RIPK3-206ENST00000557624 RNASE7Q9H1E1 156 aaKnown RBP10.21□□□□□ -0.78
RIPK3-206ENST00000557624 IGKV3D-20A0A0C4DH25 116 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 IGHV4-28A0A0C4DH34 117 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 NUPR1O60356 82 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 P01737 135 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 MIFP14174 115 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 EMP1P54849 157 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 LINC00310P59036 64 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 IL36BQ9NZH7 164 aa10.2□□□□□ -0.78
RIPK3-206ENST00000557624 C19orf71A6NCJ1 209 aa10.19□□□□□ -0.78
RIPK3-206ENST00000557624 GNRH2O43555 120 aa10.19□□□□□ -0.78
RIPK3-206ENST00000557624 TDRG1Q3Y452 100 aa10.19□□□□□ -0.78
RIPK3-206ENST00000557624 Q8NAQ8 132 aa10.19□□□□□ -0.78
RIPK3-206ENST00000557624 TMEM263Q8WUH6 116 aaKnown RBP10.19□□□□□ -0.78
RIPK3-206ENST00000557624 MRPL18Q9H0U6 180 aaKnown RBP10.19□□□□□ -0.78
RIPK3-206ENST00000557624 TMEM189A5PLL7 270 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
RIPK3-206ENST00000557624 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 SCGB1A1P11684 91 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 KRTDAPP60985 99 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 OR10G8Q8NGN5 311 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 MDFICQ9P1T7 246 aa10.18□□□□□ -0.78
RIPK3-206ENST00000557624 COL7A1Q02388 2944 aa10.17□□□□□ -0.78
RIPK3-206ENST00000557624 A0A0J9YWU9 116 aa10.17□□□□□ -0.78
RIPK3-206ENST00000557624 VAMP3Q15836 100 aa10.17□□□□□ -0.78
RIPK3-206ENST00000557624 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
RIPK3-206ENST00000557624 C11orf72Q8NBR9 251 aa10.17□□□□□ -0.78
RIPK3-206ENST00000557624 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
RIPK3-206ENST00000557624 STAB2Q8WWQ8 2551 aa10.17□□□□□ -0.78
RIPK3-206ENST00000557624 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 PLAC8L1A1L4L8 177 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 SNURFLB1AK76 121 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 S100A4P26447 101 aaKnown RBP10.16□□□□□ -0.78
RIPK3-206ENST00000557624 ASIPP42127 132 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 FAM231DQ6ZW35 169 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 NIT1Q86X76 327 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 RPP21Q9H633 154 aaKnown RBP10.16□□□□□ -0.78
RIPK3-206ENST00000557624 U3KQK5 164 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
RIPK3-206ENST00000557624 AMTP48728 403 aa10.15□□□□□ -0.78
RIPK3-206ENST00000557624 BORCS7Q96B45 105 aa10.15□□□□□ -0.78
RIPK3-206ENST00000557624 H3BVH4 76 aa10.15□□□□□ -0.79
RIPK3-206ENST00000557624 TCL1AP56279 114 aa10.15□□□□□ -0.79
RIPK3-206ENST00000557624 RASL11AQ6T310 242 aa10.15□□□□□ -0.79
RIPK3-206ENST00000557624 ZNF575Q86XF7 245 aa10.15□□□□□ -0.79
RIPK3-206ENST00000557624 C11orf68Q9H3H3 251 aaKnown RBP10.15□□□□□ -0.79
RIPK3-206ENST00000557624 ST20Q9HBF5 79 aa10.15□□□□□ -0.79
RIPK3-206ENST00000557624 NOP10Q9NPE3 64 aaKnown RBP10.15□□□□□ -0.79
RIPK3-206ENST00000557624 OSTCQ9NRP0 149 aa10.15□□□□□ -0.79
RIPK3-206ENST00000557624 HUWE1Q7Z6Z7 4374 aaKnown RBP10.14□□□□□ -0.79
RIPK3-206ENST00000557624 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
RIPK3-206ENST00000557624 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
RIPK3-206ENST00000557624 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
RIPK3-206ENST00000557624 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
RIPK3-206ENST00000557624 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
RIPK3-206ENST00000557624 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
RIPK3-206ENST00000557624 MUC4Q99102 2169 aa10.13□□□□□ -0.79
RIPK3-206ENST00000557624 ARMS2P0C7Q2 107 aa10.12□□□□□ -0.79
RIPK3-206ENST00000557624 C3orf79P0CE67 100 aa10.12□□□□□ -0.79
RIPK3-206ENST00000557624 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
RIPK3-206ENST00000557624 IL17DQ8TAD2 202 aa10.12□□□□□ -0.79
RIPK3-206ENST00000557624 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
RIPK3-206ENST00000557624 V9GYV3 84 aa10.12□□□□□ -0.79
RIPK3-206ENST00000557624 TGP01266 2768 aa10.12□□□□□ -0.79
RIPK3-206ENST00000557624 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 DAZ2Q13117 558 aaKnown RBP10.11□□□□□ -0.79
RIPK3-206ENST00000557624 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 MRPL16Q9NX20 251 aaKnown RBP10.11□□□□□ -0.79
RIPK3-206ENST00000557624 DKK2Q9UBU2 259 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 MUC21A0A0G2JKD1 596 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 MUC21A0A140T8X8 626 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 A8MWL6 223 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 SPART-AS1P0CW21 52 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 CT83Q5H943 113 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 Q6ZTI0 123 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 SPXQ9BT56 116 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 PHLDA3Q9Y5J5 127 aa10.11□□□□□ -0.79
RIPK3-206ENST00000557624 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
RIPK3-206ENST00000557624 M0R2P5 195 aa10.1□□□□□ -0.79
RIPK3-206ENST00000557624 MAJINQ3KP22 176 aa10.1□□□□□ -0.79
RIPK3-206ENST00000557624 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
RIPK3-206ENST00000557624 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
RIPK3-206ENST00000557624 PMCHL2Q9BQD1 86 aa10.1□□□□□ -0.79
RIPK3-206ENST00000557624 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
RIPK3-206ENST00000557624 TAX1BP3O14907 124 aa10.09□□□□□ -0.79
RIPK3-206ENST00000557624 SPINK4O60575 86 aa10.09□□□□□ -0.79
RIPK3-206ENST00000557624 GAGE7O76087 117 aa10.09□□□□□ -0.79
RIPK3-206ENST00000557624 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms