RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CACNG7P62955 275 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 Q6ZSN1 163 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 COMMD7Q86VX2 200 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 SLC25A29Q8N8R3 303 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 V9GYV3 84 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 DNAH1Q9P2D7 4330 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 A8MWL6 223 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 F2Z2F3 143 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 RHOHQ15669 191 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 UQCC3Q6UW78 93 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 UBE2DNLQ8IWF7 75 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 C15orf54Q8N8G6 183 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
VIPAS39-210ENST00000557466 SACSQ9NZJ4 4579 aa10.29□□□□□ -0.76
VIPAS39-210ENST00000557466 LINC00862A6NCI5 91 aa10.29□□□□□ -0.76
VIPAS39-210ENST00000557466 K7EQD1 137 aa10.29□□□□□ -0.76
VIPAS39-210ENST00000557466 OR10G8Q8NGN5 311 aa10.29□□□□□ -0.76
VIPAS39-210ENST00000557466 CNFNQ9BYD5 112 aa10.29□□□□□ -0.76
VIPAS39-210ENST00000557466 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
VIPAS39-210ENST00000557466 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
VIPAS39-210ENST00000557466 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-210ENST00000557466 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-210ENST00000557466 TSKUQ8WUA8 353 aa10.28□□□□□ -0.76
VIPAS39-210ENST00000557466 PRADC1Q9BSG0 188 aa10.28□□□□□ -0.76
VIPAS39-210ENST00000557466 LYSTQ99698 3801 aa10.27□□□□□ -0.76
VIPAS39-210ENST00000557466 NTF3P20783 257 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 SRIP30626 198 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 ZNF56Q15929 161 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 ESRGQ1W209 222 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 RNF212Q495C1 297 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 WDR73Q6P4I2 378 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 GFRA4Q9GZZ7 299 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 LINC00588Q9Y4M8 146 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
VIPAS39-210ENST00000557466 TMEM218A2RU14 115 aa10.26□□□□□ -0.77
VIPAS39-210ENST00000557466 HIGD1CA8MV81 97 aa10.26□□□□□ -0.77
VIPAS39-210ENST00000557466 FOXA3P55318 350 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-210ENST00000557466 CCL18P55774 89 aa10.26□□□□□ -0.77
VIPAS39-210ENST00000557466 Q9UF83 564 aa10.26□□□□□ -0.77
VIPAS39-210ENST00000557466 FAM231BA6NCW3 169 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 TRGC1P0CF51 173 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 SMIM17P0DL12 118 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 EVI2AP22794 236 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 LINC00315P59091 139 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 PNRC1Q12796 327 aaPredicted RBP10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 TWIST1Q15672 202 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 NEGR1Q7Z3B1 354 aa10.25□□□□□ -0.77
VIPAS39-210ENST00000557466 MGPP08493 103 aa10.24□□□□□ -0.77
VIPAS39-210ENST00000557466 LINC00694P0DN24 101 aa10.24□□□□□ -0.77
VIPAS39-210ENST00000557466 RAB4BP61018 213 aa10.24□□□□□ -0.77
VIPAS39-210ENST00000557466 MRPS16Q9Y3D3 137 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-210ENST00000557466 VPS13DQ5THJ4 4388 aa10.24□□□□□ -0.77
VIPAS39-210ENST00000557466 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 F8W036 122 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 FAM3BP58499 235 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 GAGE1Q13065 139 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 GAGE4Q13068 117 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 GAGE5Q13069 117 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 GAGE13Q4V321 117 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 LYPD5Q6UWN5 251 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 NUP35Q8NFH5 326 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 ZNRF2Q8NHG8 242 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 DPH3P1Q9H4G8 78 aa10.23□□□□□ -0.77
VIPAS39-210ENST00000557466 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 SMIM27A0A1W2PRY6 76 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 F5H697 171 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 BORCS7Q96B45 105 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 UPK3BQ9BT76 320 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 NAT8BQ9UHF3 227 aa10.22□□□□□ -0.77
VIPAS39-210ENST00000557466 RYR2Q92736 4967 aa10.21□□□□□ -0.77
VIPAS39-210ENST00000557466 IGLV2-18A0A075B6J9 118 aa10.21□□□□□ -0.77
VIPAS39-210ENST00000557466 TRBV10-1A0A0K0K1A3 114 aa10.21□□□□□ -0.77
VIPAS39-210ENST00000557466 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.77
VIPAS39-210ENST00000557466 SEC11CQ9BY50 192 aa10.21□□□□□ -0.77
VIPAS39-210ENST00000557466 PPP1R2P9O14990 202 aa10.2□□□□□ -0.78
VIPAS39-210ENST00000557466 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
VIPAS39-210ENST00000557466 ATP6V0E2Q8NHE4 81 aa10.2□□□□□ -0.78
VIPAS39-210ENST00000557466 ANAPC16Q96DE5 110 aa10.19□□□□□ -0.78
VIPAS39-210ENST00000557466 DNAH6Q9C0G6 4158 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 M0QY20 66 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 MT-ND4LP03901 98 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 TIRAPP58753 221 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 RPL36AP83881 106 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 RIGQ13278 110 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 C10orf91Q5T1B1 145 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 SMIM15Q7Z3B0 74 aa10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 RPL36ALQ969Q0 106 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 CARHSP1Q9Y2V2 147 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-210ENST00000557466 HYDINQ4G0P3 5121 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 M0R2N4 97 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 UBE2D3P61077 147 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 UBE2D2P62837 147 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 WFDC10BQ8IUB3 73 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 Q9H8V8 135 aa10.17□□□□□ -0.78
VIPAS39-210ENST00000557466 TRAV26-2A0A0B4J265 109 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms