RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 GZMBP10144 247 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 SPCS2Q15005 226 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 GCSAMLQ5JQS6 135 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 CFAP161Q6P656 301 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
NEDD1-211ENST00000557454 DYNC2LI1Q8TCX1 351 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 FAM167A-AS1Q96KT0 104 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 PRRT1Q99946 306 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 BCL7BQ9BQE9 202 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 TREM1Q9NP99 234 aa5.49□□□□□ -1.53
NEDD1-211ENST00000557454 MACF1Q9UPN3 7388 aaKnown RBP5.48□□□□□ -1.53
NEDD1-211ENST00000557454 PIGBOS1A0A0B4J2F0 54 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 TRBV10-1A0A0K0K1A3 114 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 FAM25AB3EWG3 89 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 FAM25CB3EWG5 89 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 FAM25GB3EWG6 89 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 ZNF80P51504 273 aaPredicted RBP5.48□□□□□ -1.53
NEDD1-211ENST00000557454 RAB2AP61019 212 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 RANP62826 216 aaKnown RBP5.48□□□□□ -1.53
NEDD1-211ENST00000557454 EIF5AP63241 154 aaKnown RBP5.48□□□□□ -1.53
NEDD1-211ENST00000557454 FXYD5Q96DB9 178 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 SMIM8Q96KF7 97 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 RABL2AQ9UBK7 228 aaPredicted RBP5.48□□□□□ -1.53
NEDD1-211ENST00000557454 PKIGQ9Y2B9 76 aa5.48□□□□□ -1.53
NEDD1-211ENST00000557454 CARHSP1Q9Y2V2 147 aaKnown RBP5.48□□□□□ -1.53
NEDD1-211ENST00000557454 GVQW2A0A096LPI5 108 aaPredicted RBP5.47□□□□□ -1.53
NEDD1-211ENST00000557454 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 GABARAPL2P60520 117 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 RAB32Q13637 225 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 PIK3CD-AS1Q5SR53 167 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 NTM-AS1Q6ZSK4 140 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 MIR17HGQ75NE6 70 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 CLVS1Q8IUQ0 354 aaPredicted RBP5.47□□□□□ -1.53
NEDD1-211ENST00000557454 C20orf203Q8NBC4 194 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 HYLS1Q96M11 299 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 CNBD2Q96M20 576 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
NEDD1-211ENST00000557454 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 TSC22D2O75157 780 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 AKAIN1P0CW23 69 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 RPL29P47914 159 aaKnown RBP5.46□□□□□ -1.54
NEDD1-211ENST00000557454 LSM3P62310 102 aaKnown RBP5.46□□□□□ -1.54
NEDD1-211ENST00000557454 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 SCGB3A2Q96PL1 93 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 SLIRPQ9GZT3 109 aaKnown RBP5.46□□□□□ -1.54
NEDD1-211ENST00000557454 RPP21Q9H633 154 aaKnown RBP5.46□□□□□ -1.54
NEDD1-211ENST00000557454 EXTL2Q9UBQ6 330 aa5.46□□□□□ -1.54
NEDD1-211ENST00000557454 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
NEDD1-211ENST00000557454 S100A4P26447 101 aaKnown RBP5.45□□□□□ -1.54
NEDD1-211ENST00000557454 C9orf116Q5BN46 136 aaPredicted RBP5.45□□□□□ -1.54
NEDD1-211ENST00000557454 GOLT1AQ6ZVE7 132 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 OR10G8Q8NGN5 311 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 CARD19Q96LW7 228 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 NMES1Q9C002 83 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 MIXL1Q9H2W2 232 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 PHLDA3Q9Y5J5 127 aa5.45□□□□□ -1.54
NEDD1-211ENST00000557454 IGLV4-60A0A075B6I1 120 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 A0A087WZ39 114 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 MBPP02686 304 aaPredicted RBP5.44□□□□□ -1.54
NEDD1-211ENST00000557454 NEXN-AS1Q8NBZ9 246 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 LINC00526Q96FQ7 95 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 SCP2D1Q9UJQ7 156 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 WDR83OSQ9Y284 106 aa5.44□□□□□ -1.54
NEDD1-211ENST00000557454 TRBV25-1A0A075B6N4 114 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 A0A087X002 238 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 UBE2L5PA0A1B0GUS4 154 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 F5H697 171 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 GCGP01275 180 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 SSBP1Q04837 148 aaKnown RBP5.43□□□□□ -1.54
NEDD1-211ENST00000557454 BAXQ07812 192 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 ZNF674Q2M3X9 581 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 TMEM128Q5BJH2 165 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 LINC00173Q6ZV60 143 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 SGK494Q96LW2 274 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 NAA50Q9GZZ1 169 aaKnown RBP5.43□□□□□ -1.54
NEDD1-211ENST00000557454 PPDPFQ9H3Y8 114 aa5.43□□□□□ -1.54
NEDD1-211ENST00000557454 H3BVH4 76 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 OR7C2O60412 319 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 SULT1A2P50226 295 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 NEDD8Q15843 81 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.42□□□□□ -1.54
NEDD1-211ENST00000557454 MITD1Q8WV92 249 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 DERL1Q9BUN8 251 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 KRTAP3-1Q9BYR8 98 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 UQCC1Q9NVA1 299 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 MCUBQ9NWR8 336 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 OR5AC2Q9NZP5 309 aa5.42□□□□□ -1.54
NEDD1-211ENST00000557454 IGKV3D-20A0A0C4DH25 116 aa5.41□□□□□ -1.54
NEDD1-211ENST00000557454 SFT2D2O95562 160 aa5.41□□□□□ -1.54
NEDD1-211ENST00000557454 TAS2R30P59541 319 aa5.41□□□□□ -1.54
NEDD1-211ENST00000557454 UBE2L3P68036 154 aaKnown RBP5.41□□□□□ -1.54
NEDD1-211ENST00000557454 PPP1R1AQ13522 171 aa5.41□□□□□ -1.54
NEDD1-211ENST00000557454 OR11H4Q8NGC9 324 aa5.41□□□□□ -1.54
NEDD1-211ENST00000557454 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
NEDD1-211ENST00000557454 CMTM2Q8TAZ6 248 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms