RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 ARMS2P0C7Q2 107 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 DEFA1P59665 94 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 DEFA3P59666 94 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 DNLZQ5SXM8 178 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 ATRAIDQ6UW56 229 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 OR11H4Q8NGC9 324 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 TNFSF18Q9UNG2 199 aa11.15□□□□□ -0.62
NEDD1-210ENST00000557400 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
NEDD1-210ENST00000557400 Q86TA4 180 aa11.14□□□□□ -0.63
NEDD1-210ENST00000557400 AQP10Q96PS8 301 aa11.14□□□□□ -0.63
NEDD1-210ENST00000557400 A0A087WWL8 130 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 KRBOX1C9JBD0 128 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 M0R036 132 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 PEX7O00628 323 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 Q0VG73 95 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 C14orf177Q52M58 125 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
NEDD1-210ENST00000557400 CRIP1P50238 77 aa11.12□□□□□ -0.63
NEDD1-210ENST00000557400 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
NEDD1-210ENST00000557400 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-210ENST00000557400 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
NEDD1-210ENST00000557400 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
NEDD1-210ENST00000557400 PHLDA3Q9Y5J5 127 aa11.12□□□□□ -0.63
NEDD1-210ENST00000557400 GRIFINA4D1Z8 144 aa11.11□□□□□ -0.63
NEDD1-210ENST00000557400 SH2D1AO60880 128 aa11.11□□□□□ -0.63
NEDD1-210ENST00000557400 UBE2G2P60604 165 aa11.11□□□□□ -0.63
NEDD1-210ENST00000557400 COX8CQ7Z4L0 72 aa11.11□□□□□ -0.63
NEDD1-210ENST00000557400 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
NEDD1-210ENST00000557400 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
NEDD1-210ENST00000557400 M0R381 172 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 TPT1P13693 172 aaKnown RBP11.1□□□□□ -0.63
NEDD1-210ENST00000557400 UBE2D3P61077 147 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 UBE2D2P62837 147 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 ZNF726P1Q15940 193 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 FAM162BQ5T6X4 162 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 NKX6-2Q9C056 277 aaPredicted RBP11.1□□□□□ -0.63
NEDD1-210ENST00000557400 PLA2G2DQ9UNK4 145 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
NEDD1-210ENST00000557400 TRBV7-3A0A075B6L6 115 aa11.09□□□□□ -0.63
NEDD1-210ENST00000557400 ZFP82Q8N141 532 aa11.09□□□□□ -0.63
NEDD1-210ENST00000557400 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
NEDD1-210ENST00000557400 TRBV6-8A0A0A6YYG3 113 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 FAM74A7A6NL05 159 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 TMEM262E9PQX1 116 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 CRPP02741 224 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 RPL37AP61513 92 aaKnown RBP11.08□□□□□ -0.64
NEDD1-210ENST00000557400 ENHOQ6UWT2 76 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 ALG5Q9Y673 324 aa11.08□□□□□ -0.64
NEDD1-210ENST00000557400 TMSB15BA0A087X1C1 80 aa11.07□□□□□ -0.64
NEDD1-210ENST00000557400 LINC01559Q495D7 138 aa11.07□□□□□ -0.64
NEDD1-210ENST00000557400 C15orf54Q8N8G6 183 aa11.07□□□□□ -0.64
NEDD1-210ENST00000557400 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
NEDD1-210ENST00000557400 FMC1Q96HJ9 113 aa11.07□□□□□ -0.64
NEDD1-210ENST00000557400 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
NEDD1-210ENST00000557400 UBE2G1P62253 170 aa11.06□□□□□ -0.64
NEDD1-210ENST00000557400 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
NEDD1-210ENST00000557400 RPL7L1Q6DKI1 246 aaKnown RBP11.06□□□□□ -0.64
NEDD1-210ENST00000557400 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
NEDD1-210ENST00000557400 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
NEDD1-210ENST00000557400 ANGP03950 147 aaKnown RBP11.05□□□□□ -0.64
NEDD1-210ENST00000557400 MPV17L2Q567V2 206 aa11.05□□□□□ -0.64
NEDD1-210ENST00000557400 HLA-DQA1P01909 254 aa11.04□□□□□ -0.64
NEDD1-210ENST00000557400 RAB4BP61018 213 aa11.04□□□□□ -0.64
NEDD1-210ENST00000557400 Q5BKY6 102 aa11.04□□□□□ -0.64
NEDD1-210ENST00000557400 INO80EQ8NBZ0 244 aaPredicted RBP11.04□□□□□ -0.64
NEDD1-210ENST00000557400 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 PTTG1O95997 202 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 LTAP01374 205 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
NEDD1-210ENST00000557400 PKIAP61925 76 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 MIAQ16674 131 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 AKR1C8PQ5T2L2 129 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
NEDD1-210ENST00000557400 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 CHCHD5Q9BSY4 110 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 MED28Q9H204 178 aa11.03□□□□□ -0.64
NEDD1-210ENST00000557400 PRSS1P07477 247 aa11.02□□□□□ -0.65
NEDD1-210ENST00000557400 ZNF56Q15929 161 aa11.02□□□□□ -0.65
NEDD1-210ENST00000557400 PRR27Q6MZM9 219 aa11.02□□□□□ -0.65
NEDD1-210ENST00000557400 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.65
NEDD1-210ENST00000557400 MAP1LC3B2A6NCE7 125 aa11.01□□□□□ -0.65
NEDD1-210ENST00000557400 A6NHS1 94 aa11.01□□□□□ -0.65
NEDD1-210ENST00000557400 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
NEDD1-210ENST00000557400 MAP1LC3BQ9GZQ8 125 aa11.01□□□□□ -0.65
NEDD1-210ENST00000557400 GIPP09681 153 aaPredicted RBP11□□□□□ -0.65
NEDD1-210ENST00000557400 FHITP49789 147 aa11□□□□□ -0.65
NEDD1-210ENST00000557400 OR10AG1Q8NH19 301 aa11□□□□□ -0.65
NEDD1-210ENST00000557400 PRR34Q9NV39 138 aa11□□□□□ -0.65
NEDD1-210ENST00000557400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11□□□□□ -0.65
NEDD1-210ENST00000557400 FXYD6-FXYD2A0A087WZ82 144 aa10.99□□□□□ -0.65
NEDD1-210ENST00000557400 AKR1C3P42330 323 aa10.99□□□□□ -0.65
NEDD1-210ENST00000557400 TMEM97Q5BJF2 176 aa10.99□□□□□ -0.65
NEDD1-210ENST00000557400 CST9LP1Q5W188 147 aa10.99□□□□□ -0.65
NEDD1-210ENST00000557400 ZNF471Q9BX82 626 aaPredicted RBP10.99□□□□□ -0.65
NEDD1-210ENST00000557400 CXCL1P09341 107 aa10.98□□□□□ -0.65
NEDD1-210ENST00000557400 RPL19P84098 196 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms