RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR2D3Q8NGH3 330 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 SSBP4Q9BWG4 385 aaPredicted RBP8.59□□□□□ -1.03
SLIRP-209ENST00000557342 JPT2Q9H910 190 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 NXPH4O95158 308 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 TIRAPP58753 221 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 FAM74A4Q5TZK3 123 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
SLIRP-209ENST00000557342 RTL8CO15255 209 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
SLIRP-209ENST00000557342 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 SEC11CQ9BY50 192 aa8.57□□□□□ -1.04
SLIRP-209ENST00000557342 A0A087WWL8 130 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 CRYGDP07320 174 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 CEBPGP53567 150 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 FAM74A3Q4VXF1 159 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 Q6ZSN1 163 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 FER1L6-AS1Q8NA97 138 aa8.56□□□□□ -1.04
SLIRP-209ENST00000557342 CARHSP1Q9Y2V2 147 aaKnown RBP8.56□□□□□ -1.04
SLIRP-209ENST00000557342 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 F2Z2F3 143 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 F8W036 122 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 K7EP13 123 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 IGLC6P0CF74 106 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 S100A1P23297 94 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 CACNG7P62955 275 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 NUDT10Q8NFP7 164 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 NUDT11Q96G61 164 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 SMIM7Q9BQ49 75 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 LY96Q9Y6Y9 160 aa8.55□□□□□ -1.04
SLIRP-209ENST00000557342 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 K7EN84 100 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 GZMBP10144 247 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 RAB4BP61018 213 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-209ENST00000557342 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
SLIRP-209ENST00000557342 RPP21Q9H633 154 aaKnown RBP8.54□□□□□ -1.04
SLIRP-209ENST00000557342 MUC21A0A0G2JKD1 596 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 MUC21A0A140T8X8 626 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 EVI2AP22794 236 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 GAGE1Q13065 139 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 GAGE4Q13068 117 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 GAGE5Q13069 117 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 ZNF56Q15929 161 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 GAGE13Q4V321 117 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 LELP1Q5T871 98 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 WFDC10BQ8IUB3 73 aa8.53□□□□□ -1.04
SLIRP-209ENST00000557342 RNASE7Q9H1E1 156 aaKnown RBP8.53□□□□□ -1.04
SLIRP-209ENST00000557342 GATCO43716 136 aaKnown RBP8.52□□□□□ -1.05
SLIRP-209ENST00000557342 DNAH10OSP0CZ25 163 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 SSTP61278 116 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
SLIRP-209ENST00000557342 OR10J3Q5JRS4 329 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
SLIRP-209ENST00000557342 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 NAT8Q9UHE5 227 aa8.52□□□□□ -1.05
SLIRP-209ENST00000557342 A0A087WWC5 75 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 F5H697 171 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-209ENST00000557342 LYZL1Q6UWQ5 148 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
SLIRP-209ENST00000557342 TRBV7-3A0A075B6L6 115 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 A8MWL6 223 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 APOC3P02656 99 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 CTRLP40313 264 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 TMEM241Q24JQ0 296 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 NFE4Q86UQ8 179 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 SVBPQ8N300 66 aa8.5□□□□□ -1.05
SLIRP-209ENST00000557342 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-209ENST00000557342 A0A1B0GVY2 172 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 NTF3P20783 257 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 LINC00315P59091 139 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 RPL23P62829 140 aaKnown RBP8.49□□□□□ -1.05
SLIRP-209ENST00000557342 CT83Q5H943 113 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 OR10G8Q8NGN5 311 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
SLIRP-209ENST00000557342 Q9UF83 564 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms