RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 CIRBP-AS1Q8TBR5 109 aa11.95□□□□□ -0.5
VIPAS39-209ENST00000556909 TNFSF18Q9UNG2 199 aa11.95□□□□□ -0.5
VIPAS39-209ENST00000556909 KRBOX1C9JBD0 128 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 M0R036 132 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 IFNA7P01567 189 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 ARMS2P0C7Q2 107 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 CRIP1P50238 77 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 ATRAIDQ6UW56 229 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 UBE2WQ96B02 151 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 ZC2HC1AQ96GY0 325 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
VIPAS39-209ENST00000556909 A0A087WWL8 130 aa11.93□□□□□ -0.5
VIPAS39-209ENST00000556909 A0A087WX48 190 aa11.93□□□□□ -0.5
VIPAS39-209ENST00000556909 UBE2G2P60604 165 aa11.93□□□□□ -0.5
VIPAS39-209ENST00000556909 ZNF726P1Q15940 193 aa11.93□□□□□ -0.5
VIPAS39-209ENST00000556909 SERTAD4-AS1Q5TG53 156 aa11.93□□□□□ -0.5
VIPAS39-209ENST00000556909 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
VIPAS39-209ENST00000556909 SH2D1AO60880 128 aa11.92□□□□□ -0.5
VIPAS39-209ENST00000556909 ELOBQ15370 118 aa11.92□□□□□ -0.5
VIPAS39-209ENST00000556909 SFRP2Q96HF1 295 aa11.92□□□□□ -0.5
VIPAS39-209ENST00000556909 M0R381 172 aa11.91□□□□□ -0.5
VIPAS39-209ENST00000556909 PHLDA3Q9Y5J5 127 aa11.91□□□□□ -0.5
VIPAS39-209ENST00000556909 CTXND1A0A1B0GTU2 59 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 FAM74A7A6NL05 159 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 OXTP01178 125 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 IGLV2-8P01709 118 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 UBE2D3P61077 147 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 UBE2D2P62837 147 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 UBR4Q5T4S7 5183 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 KCNIP4Q6PIL6 250 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 COX8CQ7Z4L0 72 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
VIPAS39-209ENST00000556909 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 RPL36AP83881 106 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 Q0VG73 95 aa11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 RPL36ALQ969Q0 106 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 ZFP30Q9Y2G7 519 aa11.89□□□□□ -0.51
VIPAS39-209ENST00000556909 TRBV7-3A0A075B6L6 115 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 TMSB15BA0A087X1C1 80 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 A6NHS1 94 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 C14orf177Q52M58 125 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 Q5BKY6 102 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 ZFP82Q8N141 532 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 C1orf43Q9BWL3 253 aa11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 NKX6-2Q9C056 277 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-209ENST00000556909 ZNF674Q2M3X9 581 aa11.87□□□□□ -0.51
VIPAS39-209ENST00000556909 ENHOQ6UWT2 76 aa11.86□□□□□ -0.51
VIPAS39-209ENST00000556909 OR10G8Q8NGN5 311 aa11.86□□□□□ -0.51
VIPAS39-209ENST00000556909 FMC1Q96HJ9 113 aa11.86□□□□□ -0.51
VIPAS39-209ENST00000556909 MED28Q9H204 178 aa11.86□□□□□ -0.51
VIPAS39-209ENST00000556909 TRBV6-8A0A0A6YYG3 113 aa11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 BORCS7-ASMTA0A0B4J1R7 106 aa11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 CRPP02741 224 aa11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 UBE2G1P62253 170 aa11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 MPV17L2Q567V2 206 aa11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-209ENST00000556909 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
VIPAS39-209ENST00000556909 LTAP01374 205 aa11.84□□□□□ -0.51
VIPAS39-209ENST00000556909 C15orf54Q8N8G6 183 aa11.84□□□□□ -0.51
VIPAS39-209ENST00000556909 PLA2G2DQ9UNK4 145 aa11.84□□□□□ -0.51
VIPAS39-209ENST00000556909 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
VIPAS39-209ENST00000556909 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
VIPAS39-209ENST00000556909 AKR1C8PQ5T2L2 129 aa11.83□□□□□ -0.52
VIPAS39-209ENST00000556909 NEXN-AS1Q8NBZ9 246 aa11.83□□□□□ -0.52
VIPAS39-209ENST00000556909 FXYD6-FXYD2A0A087WZ82 144 aa11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 HLA-DQA1P01909 254 aa11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 ANGP03950 147 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 RAB4BP61018 213 aa11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 ZNF56Q15929 161 aa11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
VIPAS39-209ENST00000556909 PTTG1O95997 202 aa11.81□□□□□ -0.52
VIPAS39-209ENST00000556909 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
VIPAS39-209ENST00000556909 TCEAL7Q9BRU2 100 aa11.81□□□□□ -0.52
VIPAS39-209ENST00000556909 OR10AG1Q8NH19 301 aa11.8□□□□□ -0.52
VIPAS39-209ENST00000556909 DAZAP1Q96EP5 407 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-209ENST00000556909 PRSS1P07477 247 aa11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 AKR1C3P42330 323 aa11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 FHITP49789 147 aa11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 RPL19P84098 196 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 MIAQ16674 131 aa11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 CHCHD5Q9BSY4 110 aa11.79□□□□□ -0.52
VIPAS39-209ENST00000556909 PKIAP61925 76 aa11.78□□□□□ -0.52
VIPAS39-209ENST00000556909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-209ENST00000556909 CXCL1P09341 107 aa11.77□□□□□ -0.53
VIPAS39-209ENST00000556909 DGAT2L7PQ6IED9 249 aa11.77□□□□□ -0.53
VIPAS39-209ENST00000556909 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
VIPAS39-209ENST00000556909 C9orf163Q8N9P6 203 aa11.77□□□□□ -0.53
VIPAS39-209ENST00000556909 STOML3Q8TAV4 291 aa11.77□□□□□ -0.53
VIPAS39-209ENST00000556909 ZNF471Q9BX82 626 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-209ENST00000556909 PANO1I0J062 215 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms