RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 A0A087WWL8 130 aa12.25□□□□□ -0.45
PSEN1-218ENST00000556864 TRBV6-4A0A1B0GX49 114 aa12.25□□□□□ -0.45
PSEN1-218ENST00000556864 MT-ND4LP03901 98 aa12.25□□□□□ -0.45
PSEN1-218ENST00000556864 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
PSEN1-218ENST00000556864 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
PSEN1-218ENST00000556864 JPT2Q9H910 190 aa12.25□□□□□ -0.45
PSEN1-218ENST00000556864 HIGD1CA8MV81 97 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 P0DMU3 169 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 SSTP61278 116 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 SAMD10Q9BYL1 202 aa12.24□□□□□ -0.45
PSEN1-218ENST00000556864 K7EQD1 137 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 FOXA3P55318 350 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-218ENST00000556864 TWIST1Q15672 202 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 ZNF56Q15929 161 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 UFSP1Q6NVU6 142 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 LINC00476Q8WZB0 136 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 NAT8BQ9UHF3 227 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 MUC4Q99102 2169 aa12.23□□□□□ -0.45
PSEN1-218ENST00000556864 LCE6AA0A183 80 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 CRYGDP07320 174 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 GYPEP15421 78 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
PSEN1-218ENST00000556864 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 SH2D6Q7Z4S9 175 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 C14orf178Q8N769 122 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-218ENST00000556864 ANAPC16Q96DE5 110 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 CSMD3Q7Z407 3707 aa12.22□□□□□ -0.45
PSEN1-218ENST00000556864 A0A1B0GUT8 65 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 NTF3P20783 257 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 SRIP30626 198 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 RAB4BP61018 213 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 PLECQ15149 4684 aaKnown RBP12.21□□□□□ -0.45
PSEN1-218ENST00000556864 NDUFA5Q16718 116 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 RNF212Q495C1 297 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
PSEN1-218ENST00000556864 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.45
PSEN1-218ENST00000556864 ALMS1Q8TCU4 4167 aa12.2□□□□□ -0.46
PSEN1-218ENST00000556864 A0A096LPF7 62 aa12.2□□□□□ -0.46
PSEN1-218ENST00000556864 MGPP08493 103 aa12.2□□□□□ -0.46
PSEN1-218ENST00000556864 RIGQ13278 110 aa12.2□□□□□ -0.46
PSEN1-218ENST00000556864 MSRB1Q9NZV6 116 aa12.2□□□□□ -0.46
PSEN1-218ENST00000556864 F5H697 171 aa12.19□□□□□ -0.46
PSEN1-218ENST00000556864 LY6G6CO95867 125 aa12.19□□□□□ -0.46
PSEN1-218ENST00000556864 CCL18P55774 89 aa12.19□□□□□ -0.46
PSEN1-218ENST00000556864 NUP35Q8NFH5 326 aa12.19□□□□□ -0.46
PSEN1-218ENST00000556864 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
PSEN1-218ENST00000556864 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
PSEN1-218ENST00000556864 KIF25-AS1Q9Y6Z4 181 aa12.18□□□□□ -0.46
PSEN1-218ENST00000556864 A0A1B0GW15 77 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 H7C1H1 209 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 S100A8P05109 93 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 EVI2AP22794 236 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 FAM3BP58499 235 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-218ENST00000556864 NEGR1Q7Z3B1 354 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 CTDSP1Q9GZU7 261 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 TENM2Q9NT68 2774 aa12.17□□□□□ -0.46
PSEN1-218ENST00000556864 LOC100131303A0A0U1RQF7 123 aa12.16□□□□□ -0.46
PSEN1-218ENST00000556864 RHEBQ15382 184 aa12.16□□□□□ -0.46
PSEN1-218ENST00000556864 Q6ZSN1 163 aa12.16□□□□□ -0.46
PSEN1-218ENST00000556864 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
PSEN1-218ENST00000556864 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
PSEN1-218ENST00000556864 GAGE1Q13065 139 aa12.15□□□□□ -0.46
PSEN1-218ENST00000556864 GAGE4Q13068 117 aa12.15□□□□□ -0.46
PSEN1-218ENST00000556864 GAGE5Q13069 117 aa12.15□□□□□ -0.46
PSEN1-218ENST00000556864 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
PSEN1-218ENST00000556864 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
PSEN1-218ENST00000556864 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
PSEN1-218ENST00000556864 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
PSEN1-218ENST00000556864 ATP5L2Q7Z4Y8 100 aa12.14□□□□□ -0.47
PSEN1-218ENST00000556864 LINC00694P0DN24 101 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 LINC00315P59091 139 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 HBBP68871 147 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 KCNIP4Q6PIL6 250 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 SVBPQ8N300 66 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 CLRN3Q8NCR9 226 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 IMMP2LQ96T52 175 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
PSEN1-218ENST00000556864 MRPS16Q9Y3D3 137 aaKnown RBP12.13□□□□□ -0.47
PSEN1-218ENST00000556864 APOC3P02656 99 aa12.12□□□□□ -0.47
PSEN1-218ENST00000556864 TIRAPP58753 221 aa12.12□□□□□ -0.47
PSEN1-218ENST00000556864 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-218ENST00000556864 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
PSEN1-218ENST00000556864 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
PSEN1-218ENST00000556864 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
PSEN1-218ENST00000556864 A0A087WWC5 75 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 SNAPINO95295 136 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 S100PP25815 95 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 ESRGQ1W209 222 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 MRPL54Q6P161 138 aaKnown RBP12.11□□□□□ -0.47
PSEN1-218ENST00000556864 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 FRZBQ92765 325 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
PSEN1-218ENST00000556864 TRBV7-3A0A075B6L6 115 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms