RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 OR10AG1Q8NH19 301 aa7.06□□□□□ -1.28
SNX6-208ENST00000556712 MED9Q9NWA0 146 aa7.06□□□□□ -1.28
SNX6-208ENST00000556712 VAX2Q9UIW0 290 aa7.06□□□□□ -1.28
SNX6-208ENST00000556712 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
SNX6-208ENST00000556712 CRYGDP07320 174 aa7.05□□□□□ -1.28
SNX6-208ENST00000556712 LINC00694P0DN24 101 aa7.05□□□□□ -1.28
SNX6-208ENST00000556712 GNG4P50150 75 aa7.05□□□□□ -1.28
SNX6-208ENST00000556712 SFRP2Q96HF1 295 aa7.05□□□□□ -1.28
SNX6-208ENST00000556712 LY96Q9Y6Y9 160 aa7.05□□□□□ -1.28
SNX6-208ENST00000556712 RHODO00212 210 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 SNAI2O43623 268 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 CXCL1P09341 107 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 MED14OSP0DP75 135 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 Q6ZRN7 208 aaPredicted RBP7.04□□□□□ -1.28
SNX6-208ENST00000556712 SH2D6Q7Z4S9 175 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 ATP6V0E2Q8NHE4 81 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
SNX6-208ENST00000556712 C19orf71A6NCJ1 209 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 RBFOX3A6NFN3 312 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 DNAH10OSP0CZ25 163 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 ZNF56Q15929 161 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 OR10J3Q5JRS4 329 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 Q8N3U1 123 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
SNX6-208ENST00000556712 K7EN84 100 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 IGHV3-33P01772 117 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 OR5AL1P0C617 328 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 IGHV3-30-3P0DP02 117 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 TIRAPP58753 221 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 TOR2AQ5JU69 321 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 LELP1Q5T871 98 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 LYPD6BQ8NI32 183 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 DAZAP1Q96EP5 407 aaKnown RBP7.02□□□□□ -1.29
SNX6-208ENST00000556712 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
SNX6-208ENST00000556712 GTSF1LQ9H1H1 148 aa7.02□□□□□ -1.29
SNX6-208ENST00000556712 TRAV8-6A0A0B4J262 113 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 IGHV3-38A0A0C4DH36 116 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 P01737 135 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 IGLC6P0CF74 106 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 EVI2AP22794 236 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
SNX6-208ENST00000556712 CEBPGP53567 150 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 SPATA12Q7Z6I5 190 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 FER1L6-AS1Q8NA97 138 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 SMIM12Q96EX1 92 aa7.01□□□□□ -1.29
SNX6-208ENST00000556712 KIAA1109Q2LD37 5005 aa7□□□□□ -1.29
SNX6-208ENST00000556712 FUSP35637 526 aaKnown RBP eCLIP7□□□□□ -1.29
SNX6-208ENST00000556712 KRTAP10-2P60368 255 aa7□□□□□ -1.29
SNX6-208ENST00000556712 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
SNX6-208ENST00000556712 NUDT10Q8NFP7 164 aa7□□□□□ -1.29
SNX6-208ENST00000556712 NUDT11Q96G61 164 aa7□□□□□ -1.29
SNX6-208ENST00000556712 AP1S3Q96PC3 154 aa7□□□□□ -1.29
SNX6-208ENST00000556712 RNASE7Q9H1E1 156 aaKnown RBP7□□□□□ -1.29
SNX6-208ENST00000556712 Q9HAA7 133 aa7□□□□□ -1.29
SNX6-208ENST00000556712 MSRB1Q9NZV6 116 aa7□□□□□ -1.29
SNX6-208ENST00000556712 TRAV9-2A0A087WT02 112 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 C16orf90A8MZG2 172 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 TMEM250H0YL14 139 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 BTF3P20290 206 aaKnown RBP6.99□□□□□ -1.29
SNX6-208ENST00000556712 RPS20P60866 119 aaKnown RBP6.99□□□□□ -1.29
SNX6-208ENST00000556712 RAB4BP61018 213 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 OCC1Q8TAD7 63 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 KIF25-AS1Q9Y6Z4 181 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 HERC2O95714 4834 aa6.99□□□□□ -1.29
SNX6-208ENST00000556712 F5H697 171 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 MGPP08493 103 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 UBE2D3P61077 147 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 UBE2D2P62837 147 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 RPL36AP83881 106 aaKnown RBP6.98□□□□□ -1.29
SNX6-208ENST00000556712 LYZL1Q6UWQ5 148 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 NFE4Q86UQ8 179 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 C10orf126Q8N4M7 172 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 NEXN-AS1Q8NBZ9 246 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
SNX6-208ENST00000556712 FAM210AQ96ND0 272 aa6.98□□□□□ -1.29
SNX6-208ENST00000556712 EIF5A2Q9GZV4 153 aaKnown RBP6.98□□□□□ -1.29
SNX6-208ENST00000556712 RPP21Q9H633 154 aaKnown RBP6.98□□□□□ -1.29
SNX6-208ENST00000556712 DNAH5Q8TE73 4624 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 TRBV10-1A0A0K0K1A3 114 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 XKRY2A2RUG3 117 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 SMIM17P0DL12 118 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 ERVFC1-1P60608 527 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 OR10G8Q8NGN5 311 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 BIN3Q9NQY0 253 aa6.97□□□□□ -1.29
SNX6-208ENST00000556712 LRP1BQ9NZR2 4599 aa6.96□□□□□ -1.29
SNX6-208ENST00000556712 IBA57-AS1B1ANH7 110 aa6.96□□□□□ -1.3
SNX6-208ENST00000556712 K7EP13 123 aa6.96□□□□□ -1.3
SNX6-208ENST00000556712 SRP19P09132 144 aaKnown RBP6.96□□□□□ -1.3
SNX6-208ENST00000556712 CTRLP40313 264 aa6.96□□□□□ -1.3
SNX6-208ENST00000556712 CACNG7P62955 275 aa6.96□□□□□ -1.3
SNX6-208ENST00000556712 DAZ4Q86SG3 579 aaKnown RBP6.96□□□□□ -1.3
SNX6-208ENST00000556712 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
SNX6-208ENST00000556712 DAZ3Q9NR90 486 aaKnown RBP6.96□□□□□ -1.3
SNX6-208ENST00000556712 A0A087WTM6 91 aa6.95□□□□□ -1.3
SNX6-208ENST00000556712 A0A087WWC5 75 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms