RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 TAX1BP3O14907 124 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 ATP6V0E1O15342 81 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 CCL25O15444 150 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 IGHV1-69P01742 117 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 TRGV3P03979 118 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 NHLRC4P0CG21 123 aaPredicted RBP4.65□□□□□ -1.67
CPSF2-205ENST00000556622 SCGB2A2Q13296 93 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 MAJINQ3KP22 176 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 TEX29Q8N6K0 151 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 C5orf56Q8N8D9 126 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 RNF152Q8N8N0 203 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 ODF3Q96PU9 254 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 VCX2Q9H322 139 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 TMEM160Q9NX00 188 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 UFC1Q9Y3C8 167 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 PHLDA3Q9Y5J5 127 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 ZFHX3Q15911 3703 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 A0A087WX48 190 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 MUC21A0A0G2JKD1 596 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 MUC21A0A140T8X8 626 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 TMEM213A2RRL7 107 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 F8W1H4 67 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 NPYP01303 97 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 MSMBP08118 114 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 SRD5A1P18405 259 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 NMUP48645 174 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 KLRD1Q13241 179 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 COTL1Q14019 142 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 MUC21Q5SSG8 566 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 RUSC1-AS1Q66K80 236 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 DYNAPQ8N1N2 210 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 TMEM141Q96I45 108 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 KIR2DL4Q99706 377 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 VGLL1Q99990 258 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 VPS25Q9BRG1 176 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 AGPAT4-IT1Q9H0P7 198 aa4.64□□□□□ -1.67
CPSF2-205ENST00000556622 DAZ1Q9NQZ3 744 aaKnown RBP4.64□□□□□ -1.67
CPSF2-205ENST00000556622 CBY3A6NI87 242 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 OR11H12B2RN74 326 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 F8VRH5 84 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 J3QLI3 93 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 K7EP34 96 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 VCYO14598 125 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 SPRY2O43597 315 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 DUSP14O95147 198 aaKnown RBP4.63□□□□□ -1.67
CPSF2-205ENST00000556622 IGHG2P01859 326 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 CD24P25063 80 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 PCP4P48539 62 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 SUMO2P61956 95 aaKnown RBP4.63□□□□□ -1.67
CPSF2-205ENST00000556622 SNRPD3P62318 126 aaKnown RBP4.63□□□□□ -1.67
CPSF2-205ENST00000556622 FHL3Q13643 280 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 KRTAP21-3Q3LHN1 58 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 OCIAD2Q56VL3 154 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 AMMECR1LQ6DCA0 310 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 FAM159AQ6UWV7 190 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 OR11H1Q8NG94 326 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 OR11H2Q8NH07 326 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 SCGB3A1Q96QR1 104 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 SMIM2Q9BVW6 85 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 TM2D2Q9BX73 214 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
CPSF2-205ENST00000556622 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
CPSF2-205ENST00000556622 A0A1W2PPM0 123 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 NDPQ00604 133 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 LDLRAD2Q5SZI1 272 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 ADAMTSL5Q6ZMM2 481 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 LINC00173Q6ZV60 143 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 GPHB5Q86YW7 130 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 APRG1Q8IVJ8 170 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 Q8TAT8 98 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 GLMPQ8WWB7 406 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 TMEM158Q8WZ71 300 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 TOMM6Q96B49 74 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 RNF185Q96GF1 192 aa4.62□□□□□ -1.67
CPSF2-205ENST00000556622 IGHV4OR15-8A0A075B7B6 117 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 A0A087WW49 117 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 A0A096LNJ9 63 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 IGKV3D-20A0A0C4DH25 116 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 IGHV7-4-1A0A0J9YVY3 117 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 CLPSL1A2RUU4 121 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 IGHV3-23P01764 117 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 IGHG4P01861 327 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 FGF6P10767 208 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 ZNF80P51504 273 aaPredicted RBP4.61□□□□□ -1.67
CPSF2-205ENST00000556622 SMAGPQ0VAQ4 97 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 ZC2HC1BQ5TFG8 222 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 C2orf91Q6ZV80 131 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 CEND1Q8N111 149 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 CHAC1Q9BUX1 264 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 HHLA3Q9XRX5 114 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 CYSLTR1Q9Y271 337 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
CPSF2-205ENST00000556622 SPCS1Q9Y6A9 102 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 S4R3C0 116 aa4.61□□□□□ -1.67
CPSF2-205ENST00000556622 NF1P21359 2839 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 MYMXA0A1B0GTQ4 84 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 DNAJC9-AS1A6NH13 148 aa4.6□□□□□ -1.67
CPSF2-205ENST00000556622 H3BUT2 72 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms