RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 OR10AC1Q8NH08 325 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 ATP6V0E2Q8NHE4 81 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 RPS4Y2Q8TD47 263 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 LRRC29Q8WV35 223 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 SLC25A21Q9BQT8 299 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-209ENST00000556353 C16orf95Q9H693 158 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 NPVFQ9HCQ7 196 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 DAZ1Q9NQZ3 744 aaKnown RBP2.74□□□□□ -1.97
PRPF39-209ENST00000556353 LINC00312Q9Y6C7 94 aa2.74□□□□□ -1.97
PRPF39-209ENST00000556353 PCLOQ9Y6V0 5065 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 A0A087WWC5 75 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 IGHV2-26A0A0B4J1V2 119 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 A0A1B0GXF2 115 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 PLAC8L1A1L4L8 177 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 F8W1H4 67 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 H3BUX3 64 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 H7C1H1 209 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 K7N7A8 449 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 M0R129 80 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 MYCNOSP40205 109 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 RBM11P57052 281 aaKnown RBP2.73□□□□□ -1.97
PRPF39-209ENST00000556353 HES1Q14469 280 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 MSMO1Q15800 293 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 LY6EQ16553 131 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 LCN12Q6JVE5 192 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 LCN8Q6JVE9 175 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 Q6ZN92 141 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 ACP7Q6ZNF0 438 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 PRR15Q8IV56 129 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 DEFB107AQ8IZN7 70 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 ATOH7Q8N100 152 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 OR2T33Q8NG76 320 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 OR10J6PQ8NGY7 276 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 SPTSSAQ969W0 71 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 LINC00526Q96FQ7 95 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 CARD19Q96LW7 228 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 AQP10Q96PS8 301 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 TTTY10Q9BZA0 68 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 IMUPQ9GZP8 106 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 TPRKBQ9Y3C4 175 aa2.73□□□□□ -1.97
PRPF39-209ENST00000556353 HERC2O95714 4834 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 IGKV1-27A0A075B6S5 117 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 TRGV10A0A0A0MS01 117 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 TRBV7-6A0A0J9YX20 115 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 ARRDC5A6NEK1 342 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 ODF3BA8MYP8 253 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 C8orf87E5RJ46 101 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 F6UB75 175 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 UPK2O00526 184 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 UQCRQO14949 82 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 ANGPTL7O43827 346 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 PGLYRP1O75594 196 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-209ENST00000556353 APOMO95445 188 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 NAPSAO96009 420 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 CD28P10747 220 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 CCL3L1P16619 93 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 ADCYAP1P18509 176 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 CCL1P22362 96 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 NFYAP23511 347 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-209ENST00000556353 GADD45AP24522 165 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 FOXA3P55318 350 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-209ENST00000556353 RPS11P62280 158 aaKnown RBP eCLIP2.72□□□□□ -1.97
PRPF39-209ENST00000556353 HERVK_113P63121 156 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 RTL8BQ17RB0 113 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 VMA21Q3ZAQ7 101 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 AADACL3Q5VUY0 350 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 TMEM61Q8N0U2 210 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 OR10G2Q8NGC3 310 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 OR4X2Q8NGF9 303 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 OR4A5Q8NH83 315 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 OTOSQ8NHW6 89 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 METTL26Q96S19 204 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 COMMD5Q9GZQ3 224 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 NAA60Q9H7X0 242 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 CMC2Q9NRP2 79 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 TVP23BQ9NYZ1 205 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 MTFP1Q9UDX5 166 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 RABAC1Q9UI14 185 aa2.72□□□□□ -1.97
PRPF39-209ENST00000556353 PKD1P98161 4303 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 IGHV3OR16-9A0A0B4J2B5 98 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 A6NIN4 97 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 MCRIP1C9JLW8 97 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 TMEM250H0YL14 139 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 K7EIL1 84 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 M0R1W7 72 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 GEMIN2O14893 280 aaKnown RBP2.71□□□□□ -1.98
PRPF39-209ENST00000556353 YPEL1O60688 119 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF737O75373 536 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 DEDDO75618 318 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 HRASP01112 189 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 IGLC2P0DOY2 106 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 IGLC3P0DOY3 106 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 COX7A1P24310 79 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 NMUP48645 174 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 CAV3P56539 151 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 SEC11AP67812 179 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 QRFPP83859 136 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF90Q03938 601 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 CENPWQ5EE01 88 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms