RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 SLC25A29Q8N8R3 303 aa14.03□□□□□ -0.16
RCCD1-205ENST00000556333 LOC100131303A0A0U1RQF7 123 aa14.02□□□□□ -0.17
RCCD1-205ENST00000556333 K7EQD1 137 aa14.02□□□□□ -0.17
RCCD1-205ENST00000556333 SRIP30626 198 aa14.02□□□□□ -0.17
RCCD1-205ENST00000556333 RHOHQ15669 191 aa14.02□□□□□ -0.17
RCCD1-205ENST00000556333 LYZL1Q6UWQ5 148 aa14.02□□□□□ -0.17
RCCD1-205ENST00000556333 TRBV6-4A0A1B0GX49 114 aa14.01□□□□□ -0.17
RCCD1-205ENST00000556333 A0A1W2PPQ1 181 aa14.01□□□□□ -0.17
RCCD1-205ENST00000556333 F2Z2F3 143 aa14.01□□□□□ -0.17
RCCD1-205ENST00000556333 NXPH4O95158 308 aa14.01□□□□□ -0.17
RCCD1-205ENST00000556333 RPL23P62829 140 aaKnown RBP14.01□□□□□ -0.17
RCCD1-205ENST00000556333 C15orf54Q8N8G6 183 aa14.01□□□□□ -0.17
RCCD1-205ENST00000556333 A8MWL6 223 aa14□□□□□ -0.17
RCCD1-205ENST00000556333 SMIM17P0DL12 118 aa14□□□□□ -0.17
RCCD1-205ENST00000556333 CACNG7P62955 275 aa14□□□□□ -0.17
RCCD1-205ENST00000556333 NEGR1Q7Z3B1 354 aa14□□□□□ -0.17
RCCD1-205ENST00000556333 LINC00588Q9Y4M8 146 aa14□□□□□ -0.17
RCCD1-205ENST00000556333 CRYGDP07320 174 aa13.99□□□□□ -0.17
RCCD1-205ENST00000556333 ZNF56Q15929 161 aa13.99□□□□□ -0.17
RCCD1-205ENST00000556333 ESRGQ1W209 222 aa13.99□□□□□ -0.17
RCCD1-205ENST00000556333 UFSP1Q6NVU6 142 aa13.99□□□□□ -0.17
RCCD1-205ENST00000556333 ISOC2Q96AB3 205 aa13.99□□□□□ -0.17
RCCD1-205ENST00000556333 Q6ZSN1 163 aa13.98□□□□□ -0.17
RCCD1-205ENST00000556333 C14orf178Q8N769 122 aaPredicted RBP13.98□□□□□ -0.17
RCCD1-205ENST00000556333 AP1S3Q96PC3 154 aa13.98□□□□□ -0.17
RCCD1-205ENST00000556333 OSTCQ9NRP0 149 aa13.98□□□□□ -0.17
RCCD1-205ENST00000556333 IGLV2-18A0A075B6J9 118 aa13.97□□□□□ -0.17
RCCD1-205ENST00000556333 FAM3BP58499 235 aaPredicted RBP13.97□□□□□ -0.17
RCCD1-205ENST00000556333 MSRB1Q9NZV6 116 aa13.97□□□□□ -0.17
RCCD1-205ENST00000556333 F5H697 171 aa13.96□□□□□ -0.17
RCCD1-205ENST00000556333 NTF3P20783 257 aa13.96□□□□□ -0.17
RCCD1-205ENST00000556333 CTRLP40313 264 aa13.96□□□□□ -0.17
RCCD1-205ENST00000556333 CT83Q5H943 113 aa13.96□□□□□ -0.17
RCCD1-205ENST00000556333 TRGC1P0CF51 173 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 TWIST1Q15672 202 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 OR10G8Q8NGN5 311 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 GTSF1Q8WW33 167 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 BORCS7Q96B45 105 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 PGLYRP4Q96LB8 373 aa13.95□□□□□ -0.18
RCCD1-205ENST00000556333 GAGE12JA6NER3 117 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 M0R2N4 97 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 MGPP08493 103 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 RAB4BP61018 213 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 GAGE1Q13065 139 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 GAGE4Q13068 117 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 GAGE5Q13069 117 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 GAGE13Q4V321 117 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 LYPD5Q6UWN5 251 aa13.94□□□□□ -0.18
RCCD1-205ENST00000556333 MRPS16Q9Y3D3 137 aaKnown RBP13.94□□□□□ -0.18
RCCD1-205ENST00000556333 WDR73Q6P4I2 378 aa13.93□□□□□ -0.18
RCCD1-205ENST00000556333 ZNRF2Q8NHG8 242 aa13.93□□□□□ -0.18
RCCD1-205ENST00000556333 TSKUQ8WUA8 353 aa13.93□□□□□ -0.18
RCCD1-205ENST00000556333 V9GYV3 84 aa13.93□□□□□ -0.18
RCCD1-205ENST00000556333 HYDINQ4G0P3 5121 aa13.92□□□□□ -0.18
RCCD1-205ENST00000556333 UQCC3Q6UW78 93 aa13.92□□□□□ -0.18
RCCD1-205ENST00000556333 COMMD7Q86VX2 200 aa13.92□□□□□ -0.18
RCCD1-205ENST00000556333 HIGD1CA8MV81 97 aa13.91□□□□□ -0.18
RCCD1-205ENST00000556333 EVI2AP22794 236 aa13.91□□□□□ -0.18
RCCD1-205ENST00000556333 ATP6V0E2Q8NHE4 81 aa13.91□□□□□ -0.18
RCCD1-205ENST00000556333 GFRA4Q9GZZ7 299 aa13.91□□□□□ -0.18
RCCD1-205ENST00000556333 Q9H8V8 135 aa13.91□□□□□ -0.18
RCCD1-205ENST00000556333 SMIM15Q7Z3B0 74 aa13.9□□□□□ -0.18
RCCD1-205ENST00000556333 UPK3BQ9BT76 320 aa13.9□□□□□ -0.18
RCCD1-205ENST00000556333 CNFNQ9BYD5 112 aa13.9□□□□□ -0.18
RCCD1-205ENST00000556333 DPH3P1Q9H4G8 78 aa13.9□□□□□ -0.18
RCCD1-205ENST00000556333 Q9UF83 564 aa13.9□□□□□ -0.18
RCCD1-205ENST00000556333 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
RCCD1-205ENST00000556333 FAM231BA6NCW3 169 aa13.89□□□□□ -0.19
RCCD1-205ENST00000556333 RPL36AP83881 106 aaKnown RBP13.89□□□□□ -0.19
RCCD1-205ENST00000556333 RPL36ALQ969Q0 106 aaKnown RBP13.89□□□□□ -0.19
RCCD1-205ENST00000556333 TRBV10-1A0A0K0K1A3 114 aa13.88□□□□□ -0.19
RCCD1-205ENST00000556333 FOXA3P55318 350 aaPredicted RBP13.88□□□□□ -0.19
RCCD1-205ENST00000556333 PNRC1Q12796 327 aaPredicted RBP13.88□□□□□ -0.19
RCCD1-205ENST00000556333 F8W036 122 aa13.87□□□□□ -0.19
RCCD1-205ENST00000556333 GTSF1LQ9H1H1 148 aa13.87□□□□□ -0.19
RCCD1-205ENST00000556333 NAT8BQ9UHF3 227 aa13.87□□□□□ -0.19
RCCD1-205ENST00000556333 A0A1B0GUT8 65 aa13.86□□□□□ -0.19
RCCD1-205ENST00000556333 SIVA1O15304 175 aa13.86□□□□□ -0.19
RCCD1-205ENST00000556333 LINC00315P59091 139 aa13.86□□□□□ -0.19
RCCD1-205ENST00000556333 TRBV7-3A0A075B6L6 115 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 TMEM218A2RU14 115 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 H7C1H1 209 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 OR10J3Q5JRS4 329 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 NEXN-AS1Q8NBZ9 246 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 NUP35Q8NFH5 326 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 VPS13DQ5THJ4 4388 aa13.85□□□□□ -0.19
RCCD1-205ENST00000556333 NBDYA0A0U1RRE5 68 aa13.84□□□□□ -0.19
RCCD1-205ENST00000556333 PPP1R2P9O14990 202 aa13.84□□□□□ -0.19
RCCD1-205ENST00000556333 LINC00694P0DN24 101 aa13.84□□□□□ -0.19
RCCD1-205ENST00000556333 RIGQ13278 110 aa13.84□□□□□ -0.19
RCCD1-205ENST00000556333 SUMO4Q6EEV6 95 aa13.84□□□□□ -0.19
RCCD1-205ENST00000556333 WFDC10BQ8IUB3 73 aa13.84□□□□□ -0.19
RCCD1-205ENST00000556333 TRAV8-6A0A0B4J262 113 aa13.83□□□□□ -0.2
RCCD1-205ENST00000556333 SMIM27A0A1W2PRY6 76 aa13.83□□□□□ -0.2
RCCD1-205ENST00000556333 TIRAPP58753 221 aa13.83□□□□□ -0.2
RCCD1-205ENST00000556333 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
RCCD1-205ENST00000556333 KMT2AQ03164 3969 aa13.82□□□□□ -0.2
RCCD1-205ENST00000556333 MT-ND4LP03901 98 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms