RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MED14OSP0DP75 135 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 BTF3P20290 206 aaKnown RBP7.9□□□□□ -1.14
SLIRP-205ENST00000556310 CENPWQ5EE01 88 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 PRR27Q6MZM9 219 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 ALKAL2Q6UX46 152 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 SMIM12Q96EX1 92 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 VAX2Q9UIW0 290 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 PHLDA3Q9Y5J5 127 aa7.9□□□□□ -1.14
SLIRP-205ENST00000556310 DYNC1H1Q14204 4646 aaKnown RBP7.89□□□□□ -1.15
SLIRP-205ENST00000556310 RHODO00212 210 aa7.89□□□□□ -1.15
SLIRP-205ENST00000556310 NKX2-5P52952 324 aaPredicted RBP7.89□□□□□ -1.15
SLIRP-205ENST00000556310 TIRAPP58753 221 aa7.89□□□□□ -1.15
SLIRP-205ENST00000556310 RPL19P84098 196 aaKnown RBP7.89□□□□□ -1.15
SLIRP-205ENST00000556310 UFSP1Q6NVU6 142 aa7.89□□□□□ -1.15
SLIRP-205ENST00000556310 ZFP82Q8N141 532 aa7.89□□□□□ -1.15
SLIRP-205ENST00000556310 M0R381 172 aa7.88□□□□□ -1.15
SLIRP-205ENST00000556310 GNG4P50150 75 aa7.88□□□□□ -1.15
SLIRP-205ENST00000556310 BLOC1S1P78537 153 aa7.88□□□□□ -1.15
SLIRP-205ENST00000556310 JPT2Q9H910 190 aa7.88□□□□□ -1.15
SLIRP-205ENST00000556310 SNAI2O43623 268 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 IGLV2-8P01709 118 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 Q6ZSN1 163 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 SFRP2Q96HF1 295 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 SAMD10Q9BYL1 202 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 MED9Q9NWA0 146 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
SLIRP-205ENST00000556310 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 RAB19A4D1S5 217 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 ZNF561-AS1K7EIQ3 104 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 K7EP13 123 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 OR5AL1P0C617 328 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 DNAH10OSP0CZ25 163 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 LINC00694P0DN24 101 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 LINC00315P59091 139 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 FAM74A4Q5TZK3 123 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 OR10AG1Q8NH19 301 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 LYPD6BQ8NI32 183 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 LY96Q9Y6Y9 160 aa7.86□□□□□ -1.15
SLIRP-205ENST00000556310 A0A087WWL8 130 aa7.85□□□□□ -1.15
SLIRP-205ENST00000556310 C19orf71A6NCJ1 209 aa7.85□□□□□ -1.15
SLIRP-205ENST00000556310 CRYGDP07320 174 aa7.85□□□□□ -1.15
SLIRP-205ENST00000556310 DAZAP1Q96EP5 407 aaKnown RBP7.85□□□□□ -1.15
SLIRP-205ENST00000556310 BIN3Q9NQY0 253 aa7.85□□□□□ -1.15
SLIRP-205ENST00000556310 TRAV9-2A0A087WT02 112 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 GAGE12JA6NER3 117 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 RBFOX3A6NFN3 312 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 TMEM250H0YL14 139 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 EVI2AP22794 236 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.15
SLIRP-205ENST00000556310 GAGE1Q13065 139 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 GAGE4Q13068 117 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 GAGE5Q13069 117 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 GAGE13Q4V321 117 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 LELP1Q5T871 98 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-205ENST00000556310 ATP6V0E2Q8NHE4 81 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 GTSF1LQ9H1H1 148 aa7.84□□□□□ -1.15
SLIRP-205ENST00000556310 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.16
SLIRP-205ENST00000556310 TRAV8-6A0A0B4J262 113 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 IGHV3-38A0A0C4DH36 116 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 P01737 135 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 IGLC6P0CF74 106 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 OR10J3Q5JRS4 329 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 SPANXN1Q5VSR9 72 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-205ENST00000556310 C10orf126Q8N4M7 172 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 HERC2O95714 4834 aa7.83□□□□□ -1.16
SLIRP-205ENST00000556310 TRBV10-1A0A0K0K1A3 114 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 XKRY2A2RUG3 117 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 LINC01556Q5JQF7 62 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 TOR2AQ5JU69 321 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 FER1L6-AS1Q8NA97 138 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 AP1S3Q96PC3 154 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 Q9UF83 564 aa7.82□□□□□ -1.16
SLIRP-205ENST00000556310 MUC21A0A0G2JKD1 596 aa7.81□□□□□ -1.16
SLIRP-205ENST00000556310 MUC21A0A140T8X8 626 aa7.81□□□□□ -1.16
SLIRP-205ENST00000556310 NDUFS6O75380 124 aaKnown RBP7.81□□□□□ -1.16
SLIRP-205ENST00000556310 GZMBP10144 247 aa7.81□□□□□ -1.16
SLIRP-205ENST00000556310 RAB4BP61018 213 aa7.81□□□□□ -1.16
SLIRP-205ENST00000556310 ZNF56Q15929 161 aa7.81□□□□□ -1.16
SLIRP-205ENST00000556310 MSRB1Q9NZV6 116 aa7.81□□□□□ -1.16
SLIRP-205ENST00000556310 A0A087WWC5 75 aa7.8□□□□□ -1.16
SLIRP-205ENST00000556310 K7EN84 100 aa7.8□□□□□ -1.16
SLIRP-205ENST00000556310 CACNG7P62955 275 aa7.8□□□□□ -1.16
SLIRP-205ENST00000556310 RPL36AP83881 106 aaKnown RBP7.8□□□□□ -1.16
SLIRP-205ENST00000556310 OR10G8Q8NGN5 311 aa7.8□□□□□ -1.16
SLIRP-205ENST00000556310 RPL36ALQ969Q0 106 aaKnown RBP7.8□□□□□ -1.16
SLIRP-205ENST00000556310 FAM210AQ96ND0 272 aa7.8□□□□□ -1.16
SLIRP-205ENST00000556310 TPPP3Q9BW30 176 aa7.8□□□□□ -1.16
SLIRP-205ENST00000556310 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 F2Z2F3 143 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 SMIM17P0DL12 118 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 CTRLP40313 264 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 NUDT10Q8NFP7 164 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 OCC1Q8TAD7 63 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms