RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 GGTLC3B5MD39 225 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 M0R036 132 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 IFNA1P01562 189 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
ATXN3-237ENST00000556274 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-237ENST00000556274 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-237ENST00000556274 PRR27Q6MZM9 219 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 RNASE8Q8TDE3 154 aaKnown RBP3.27□□□□□ -1.89
ATXN3-237ENST00000556274 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 KCNS1Q96KK3 526 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 FAM19A4Q96LR4 140 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 LENEPQ9Y5L5 61 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
ATXN3-237ENST00000556274 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 A0A096LPF7 62 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 FBLL1A6NHQ2 334 aaKnown RBP3.26□□□□□ -1.89
ATXN3-237ENST00000556274 B4DEV8 164 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 TYMSP04818 313 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 P0DMU3 169 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 FAM231AP0DMU4 169 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 FAM231CP0DMU5 169 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 SULT1A2P50226 295 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 TCTAP57738 103 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 ZNF674Q2M3X9 581 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 RNF212Q495C1 297 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 Q6AWC8 147 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 ARL6IP6Q8N6S5 226 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 FMC1Q96HJ9 113 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 SPXQ9BT56 116 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 EIF5A2Q9GZV4 153 aaKnown RBP3.26□□□□□ -1.89
ATXN3-237ENST00000556274 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
ATXN3-237ENST00000556274 MUC21A0A0G2JKD1 596 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 TRBV7-9A0A0J9YWB2 115 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 F8W036 122 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 M0R2P5 195 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 SPINK4O60575 86 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 SH2D1AO60880 128 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 S100A8P05109 93 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 S100A9P06702 114 aaKnown RBP3.25□□□□□ -1.89
ATXN3-237ENST00000556274 PFN1P07737 140 aaKnown RBP3.25□□□□□ -1.89
ATXN3-237ENST00000556274 ASIPP42127 132 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 CCL18P55774 89 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 TCL1AP56279 114 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 SNRPEP62304 92 aaKnown RBP3.25□□□□□ -1.89
ATXN3-237ENST00000556274 GAGE2BQ13066 116 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 DAZ2Q13117 558 aaKnown RBP3.25□□□□□ -1.89
ATXN3-237ENST00000556274 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 ZNF876PQ49A33 203 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 GAGE2EQ4V326 116 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 FAM162BQ5T6X4 162 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 LGALS9CQ6DKI2 356 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 GAGE2AQ6NT46 116 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-237ENST00000556274 C11orf72Q8NBR9 251 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 PCNPQ8WW12 178 aaKnown RBP3.25□□□□□ -1.89
ATXN3-237ENST00000556274 ZC2HC1AQ96GY0 325 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 MANBALQ9NQG1 85 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 GAGE2DQ9UEU5 116 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
ATXN3-237ENST00000556274 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
ATXN3-237ENST00000556274 RBFOX3A6NFN3 312 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 H3BVH4 76 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
ATXN3-237ENST00000556274 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 ARMS2P0C7Q2 107 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 RPL35P42766 123 aaKnown RBP3.24□□□□□ -1.89
ATXN3-237ENST00000556274 GNG4P50150 75 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 RAB5BP61020 215 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 CTAG1AP78358 180 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 LGALS9BQ3B8N2 356 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
ATXN3-237ENST00000556274 Q86TA4 180 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 POM121L12Q8N7R1 296 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 STPG4Q8N801 248 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 FAM210BQ96KR6 192 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
ATXN3-237ENST00000556274 PHLDA3Q9Y5J5 127 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms