RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 PSMG3Q9BT73 122 aaPredicted RBP10.05□□□□□ -0.8
SUPT16H-205ENST00000556217 C1orf43Q9BWL3 253 aa10.05□□□□□ -0.8
SUPT16H-205ENST00000556217 ACTR3CQ9C0K3 210 aaPredicted RBP10.04□□□□□ -0.8
SUPT16H-205ENST00000556217 ARL2-SNX15V9GYD0 113 aa10.04□□□□□ -0.8
SUPT16H-205ENST00000556217 TRAV34A0A0B4J273 112 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 IFNA7P01567 189 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 CRPP02741 224 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 ARMS2P0C7Q2 107 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 SERF2P84101 59 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 DNLZQ5SXM8 178 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 PHLDA3Q9Y5J5 127 aa10.03□□□□□ -0.8
SUPT16H-205ENST00000556217 A0A087WWL8 130 aa10.02□□□□□ -0.81
SUPT16H-205ENST00000556217 KRBOX1C9JBD0 128 aa10.02□□□□□ -0.81
SUPT16H-205ENST00000556217 TMEM262E9PQX1 116 aa10.02□□□□□ -0.81
SUPT16H-205ENST00000556217 SFRP2Q96HF1 295 aa10.02□□□□□ -0.81
SUPT16H-205ENST00000556217 RNF213Q63HN8 5207 aa10.02□□□□□ -0.81
SUPT16H-205ENST00000556217 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 M0R036 132 aa10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 ATP6V0CP27449 155 aa10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 Q86TA4 180 aa10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 TNFSF18Q9UNG2 199 aa10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 PKHD1L1Q86WI1 4243 aa10.01□□□□□ -0.81
SUPT16H-205ENST00000556217 M0R381 172 aa10□□□□□ -0.81
SUPT16H-205ENST00000556217 PEX7O00628 323 aa10□□□□□ -0.81
SUPT16H-205ENST00000556217 DEFA1P59665 94 aa10□□□□□ -0.81
SUPT16H-205ENST00000556217 DEFA3P59666 94 aa10□□□□□ -0.81
SUPT16H-205ENST00000556217 UBE2D3P61077 147 aa10□□□□□ -0.81
SUPT16H-205ENST00000556217 UBE2D2P62837 147 aa10□□□□□ -0.81
SUPT16H-205ENST00000556217 TRBV6-8A0A0A6YYG3 113 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 GRIFINA4D1Z8 144 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 PKIAP61925 76 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 IFITM3Q01628 133 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 FAM162BQ5T6X4 162 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 ZFP82Q8N141 532 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 HIST1H2BAQ96A08 127 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 ZC2HC1AQ96GY0 325 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 NKX6-2Q9C056 277 aaPredicted RBP9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 ZFP30Q9Y2G7 519 aa9.99□□□□□ -0.81
SUPT16H-205ENST00000556217 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
SUPT16H-205ENST00000556217 SH2D1AO60880 128 aa9.98□□□□□ -0.81
SUPT16H-205ENST00000556217 HLA-DQA1P01909 254 aa9.98□□□□□ -0.81
SUPT16H-205ENST00000556217 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
SUPT16H-205ENST00000556217 CRIP1P50238 77 aa9.98□□□□□ -0.81
SUPT16H-205ENST00000556217 DAZAP1Q96EP5 407 aaKnown RBP9.98□□□□□ -0.81
SUPT16H-205ENST00000556217 UBE2G2P60604 165 aa9.97□□□□□ -0.81
SUPT16H-205ENST00000556217 MIAQ16674 131 aa9.97□□□□□ -0.81
SUPT16H-205ENST00000556217 COX8CQ7Z4L0 72 aa9.97□□□□□ -0.81
SUPT16H-205ENST00000556217 OR10G8Q8NGN5 311 aa9.97□□□□□ -0.81
SUPT16H-205ENST00000556217 AQP10Q96PS8 301 aa9.97□□□□□ -0.81
SUPT16H-205ENST00000556217 LRP2P98164 4655 aa9.96□□□□□ -0.81
SUPT16H-205ENST00000556217 HNRNPA3P51991 378 aaKnown RBP9.96□□□□□ -0.82
SUPT16H-205ENST00000556217 RAB4BP61018 213 aa9.96□□□□□ -0.82
SUPT16H-205ENST00000556217 UBE2G1P62253 170 aa9.96□□□□□ -0.82
SUPT16H-205ENST00000556217 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
SUPT16H-205ENST00000556217 FMC1Q96HJ9 113 aa9.96□□□□□ -0.82
SUPT16H-205ENST00000556217 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.82
SUPT16H-205ENST00000556217 TMSB15BA0A087X1C1 80 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 A0A0D9SG52 128 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 CTXND1A0A1B0GTU2 59 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 PTTG1O95997 202 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 PRSS1P07477 247 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 LINC01559Q495D7 138 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
SUPT16H-205ENST00000556217 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
SUPT16H-205ENST00000556217 RPL19P84098 196 aaKnown RBP9.94□□□□□ -0.82
SUPT16H-205ENST00000556217 ZNF56Q15929 161 aa9.94□□□□□ -0.82
SUPT16H-205ENST00000556217 ZNF674Q2M3X9 581 aa9.94□□□□□ -0.82
SUPT16H-205ENST00000556217 TMEM97Q5BJF2 176 aa9.94□□□□□ -0.82
SUPT16H-205ENST00000556217 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
SUPT16H-205ENST00000556217 Q6ZRU5 148 aa9.93□□□□□ -0.82
SUPT16H-205ENST00000556217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
SUPT16H-205ENST00000556217 A6NHS1 94 aa9.92□□□□□ -0.82
SUPT16H-205ENST00000556217 ZNF726P1Q15940 193 aa9.92□□□□□ -0.82
SUPT16H-205ENST00000556217 INO80EQ8NBZ0 244 aaPredicted RBP9.92□□□□□ -0.82
SUPT16H-205ENST00000556217 NEXN-AS1Q8NBZ9 246 aa9.92□□□□□ -0.82
SUPT16H-205ENST00000556217 CLRN3Q8NCR9 226 aa9.92□□□□□ -0.82
SUPT16H-205ENST00000556217 TCEAL7Q9BRU2 100 aa9.92□□□□□ -0.82
SUPT16H-205ENST00000556217 TRBV6-1A0A0K0K1D8 114 aa9.91□□□□□ -0.82
SUPT16H-205ENST00000556217 LTAP01374 205 aa9.91□□□□□ -0.82
SUPT16H-205ENST00000556217 PRR27Q6MZM9 219 aa9.91□□□□□ -0.82
SUPT16H-205ENST00000556217 ZNF471Q9BX82 626 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-205ENST00000556217 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
SUPT16H-205ENST00000556217 ALG5Q9Y673 324 aa9.91□□□□□ -0.82
SUPT16H-205ENST00000556217 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
SUPT16H-205ENST00000556217 AKR1C8PQ5T2L2 129 aa9.9□□□□□ -0.82
SUPT16H-205ENST00000556217 RPL7L1Q6DKI1 246 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-205ENST00000556217 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
SUPT16H-205ENST00000556217 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
SUPT16H-205ENST00000556217 F5H697 171 aa9.89□□□□□ -0.83
SUPT16H-205ENST00000556217 RBX1P62877 108 aa9.89□□□□□ -0.83
SUPT16H-205ENST00000556217 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms