RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 KNCNA6PVL3 124 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 SMKR1H3BMG3 65 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 K7EMI3 77 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 CD7P09564 240 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 DDTP30046 118 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 LINC00315P59091 139 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 RPL32P62910 135 aaKnown RBP6.1□□□□□ -1.43
ATXN3-235ENST00000556082 SPINK13Q1W4C9 94 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 PIK3CD-AS1Q5SR53 167 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 NDUFA11Q86Y39 141 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 AP1S3Q96PC3 154 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 VAMP8Q9BV40 100 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 HIVEP2P31629 2446 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 HECTD1Q9ULT8 2610 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-235ENST00000556082 TRAV12-2A0A075B6T6 113 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 A0A096LNJ9 63 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 A0A1W2PRX2 142 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 GAS8-AS1O95177 125 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 NCR2O95944 276 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 IGKV3-20P01619 116 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 IGLV1-51P01701 117 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 HBDP02042 147 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 SLPIP03973 132 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 FCER1GP30273 86 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 C11orf44Q8N8P7 122 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
ATXN3-235ENST00000556082 TIMM8BQ9Y5J9 83 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-235ENST00000556082 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
ATXN3-235ENST00000556082 TRAV9-2A0A087WT02 112 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 RBMY1BA6NDE4 496 aaKnown RBP6.08□□□□□ -1.44
ATXN3-235ENST00000556082 RBMY1EA6NEQ0 496 aaKnown RBP6.08□□□□□ -1.44
ATXN3-235ENST00000556082 CRLF1O75462 422 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 RBMY1DP0C7P1 496 aaKnown RBP6.08□□□□□ -1.44
ATXN3-235ENST00000556082 ODF3L2Q3SX64 289 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 LINC01545Q5VT33 79 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 C14orf178Q8N769 122 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-235ENST00000556082 NDUFAF3Q9BU61 184 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 MDFICQ9P1T7 246 aa6.08□□□□□ -1.44
ATXN3-235ENST00000556082 AKAP9Q99996 3911 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 OR11H12B2RN74 326 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 INAFM1C9JVW0 142 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 SMIM17P0DL12 118 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 GATA1P15976 413 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-235ENST00000556082 SUMO2P61956 95 aaKnown RBP6.07□□□□□ -1.44
ATXN3-235ENST00000556082 DEFA6Q01524 100 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 LAGE3Q14657 143 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 BEAN1Q3B7T3 259 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 TRPT1Q86TN4 253 aaKnown RBP6.07□□□□□ -1.44
ATXN3-235ENST00000556082 RASL10AQ92737 203 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 SMIM2Q9BVW6 85 aa6.07□□□□□ -1.44
ATXN3-235ENST00000556082 TRBV6-5A0A0K0K1A5 114 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 CBY3A6NI87 242 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 INSP01308 110 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 CRYGDP07320 174 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 RBMY1A1P0DJD3 496 aaKnown RBP6.06□□□□□ -1.44
ATXN3-235ENST00000556082 RBMY1CP0DJD4 496 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 KRTAP10-3P60369 221 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 RBMY1FQ15415 496 aaKnown RBP6.06□□□□□ -1.44
ATXN3-235ENST00000556082 LGALS9BQ3B8N2 356 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 LGALS9CQ6DKI2 356 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 HIST2H2BDQ6DRA6 164 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 MRPL52Q86TS9 123 aaKnown RBP6.06□□□□□ -1.44
ATXN3-235ENST00000556082 EDA2RQ9HAV5 297 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 NOTCH2Q04721 2471 aa6.06□□□□□ -1.44
ATXN3-235ENST00000556082 MTORP42345 2549 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 LINC01549A6NIU2 74 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 SPRY2O43597 315 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 SAP30O75446 220 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 ATP5LO75964 103 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 G0S2P27469 103 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 NUTF2P61970 127 aaKnown RBP6.05□□□□□ -1.44
ATXN3-235ENST00000556082 CTAG1AP78358 180 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 ORMDL2Q53FV1 153 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 ZNF705AQ6ZN79 300 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-235ENST00000556082 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 C14orf144Q96I85 54 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 SPXQ9BT56 116 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 ST20Q9HBF5 79 aa6.05□□□□□ -1.44
ATXN3-235ENST00000556082 M0R2P5 195 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 VCYO14598 125 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 MGPP08493 103 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 IGLC3P0DOY3 106 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 INSL3P51460 131 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 POLR2KP53803 58 aaKnown RBP6.04□□□□□ -1.44
ATXN3-235ENST00000556082 FXYD7P58549 80 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 ZNF415Q09FC8 603 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 NSUN5P1Q3KNT7 163 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 ZNF876PQ49A33 203 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 LBHQ53QV2 105 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-235ENST00000556082 STHQ8IWL8 128 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 LINC01587Q99440 93 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 UQCR10Q9UDW1 63 aa6.04□□□□□ -1.44
ATXN3-235ENST00000556082 OTOGQ6ZRI0 2925 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms