RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SELENOKQ9Y6D0 94 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
SLIRP-204ENST00000555890 LOC102724200A0A096LPH7 203 aaPredicted RBP5.06□□□□□ -1.6
SLIRP-204ENST00000555890 TRAV25A0A0B4J276 109 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 OR4C46A6NHA9 309 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 IFITM10A6NMD0 228 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 F6UB75 175 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 CSN3P07498 182 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 ESDP10768 282 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 RNASE4P34096 147 aaKnown RBP5.06□□□□□ -1.6
SLIRP-204ENST00000555890 CACNG7P62955 275 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 TWIST1Q15672 202 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 ZNF493Q6ZR52 646 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 SMIM15Q7Z3B0 74 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 APRG1Q8IVJ8 170 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 TMEM256Q8N2U0 113 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 ZFAND2AQ8N6M9 145 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 DUX3Q96PT4 197 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 C12orf57Q99622 126 aa5.06□□□□□ -1.6
SLIRP-204ENST00000555890 ALKBH7Q9BT30 221 aaPredicted RBP5.06□□□□□ -1.6
SLIRP-204ENST00000555890 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 IGKV3D-20A0A0C4DH25 116 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 A0A0J9YX75 114 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 A0A1B0GUS0 222 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 K7EIL1 84 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 SERF1AO75920 110 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 AMBPP02760 352 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 VPREB1P12018 145 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 ASIPP42127 132 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 CMC4P56277 68 aaPredicted RBP5.05□□□□□ -1.6
SLIRP-204ENST00000555890 DEFB114Q30KQ6 69 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 ZFAND6Q6FIF0 208 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 FOXI2Q6ZQN5 318 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 C18orf32Q8TCD1 76 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 LINC00476Q8WZB0 136 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 KCNS1Q96KK3 526 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 SAMD10Q9BYL1 202 aa5.05□□□□□ -1.6
SLIRP-204ENST00000555890 KLLNB2CW77 178 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 OR5AL1P0C617 328 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 NTF3P20783 257 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 S100A4P26447 101 aaKnown RBP5.04□□□□□ -1.6
SLIRP-204ENST00000555890 PROK1P58294 105 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 DEFB1P60022 68 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 SSTP61278 116 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 DNLZQ5SXM8 178 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 PRR9Q5T870 116 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 FAM104BQ5XKR9 115 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 FAM159AQ6UWV7 190 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 SPAG8Q99932 426 aaPredicted RBP5.04□□□□□ -1.6
SLIRP-204ENST00000555890 CNFNQ9BYD5 112 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 TMEM191AQ9H0A3 160 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 SIGLEC8Q9NYZ4 499 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 C11orf21Q9P2W6 132 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 NAGKQ9UJ70 344 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 TP53TG3Q9ULZ0 132 aa5.04□□□□□ -1.6
SLIRP-204ENST00000555890 IGHV4-4A0A075B6R2 117 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 MUC21A0A0G2JKD1 596 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 MUC21A0A140T8X8 626 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 C7orf71A4D174 169 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 RHODO00212 210 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 VCYO14598 125 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 SNAI2O43623 268 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 NUPR1O60356 82 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 HSBP1O75506 76 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 PPBPP02775 128 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 CDKN1BP46527 198 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 DEFB131AP59861 70 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 JOSD1Q15040 202 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-204ENST00000555890 MUC21Q5SSG8 566 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 SPANXN1Q5VSR9 72 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
SLIRP-204ENST00000555890 NIT1Q86X76 327 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 NDUFA11Q86Y39 141 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 TMEM61Q8N0U2 210 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 ORMDL3Q8N138 153 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 CHCHD1Q96BP2 118 aaKnown RBP5.03□□□□□ -1.6
SLIRP-204ENST00000555890 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 NIT2Q9NQR4 276 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
SLIRP-204ENST00000555890 TRAV12-3A0A0B4J271 114 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 H3BVH4 76 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 ZNF324O75467 553 aaPredicted RBP5.02□□□□□ -1.61
SLIRP-204ENST00000555890 IGKV3-20P01619 116 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 LINC00614P0C842 121 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 HLA-DRB4P13762 266 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 RAB4AP20338 218 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 PMCHP20382 165 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 CKS2P33552 79 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 AMTP48728 403 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 IQCJQ1A5X6 159 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 NSUN5P1Q3KNT7 163 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 MRPL51Q4U2R6 128 aaKnown RBP5.02□□□□□ -1.61
SLIRP-204ENST00000555890 ZNF575Q86XF7 245 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 AMN1Q8IY45 258 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 OR2K2Q8NGT1 345 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 PRELID3AQ96N28 172 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 LAMTOR2Q9Y2Q5 125 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 PHLDA3Q9Y5J5 127 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 TIMM8BQ9Y5J9 83 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms