RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 GPHB5Q86YW7 130 aa13.39□□□□□ -0.27
RCCD1-204ENST00000555737 RHPN1-AS1Q9BWJ2 59 aa13.39□□□□□ -0.27
RCCD1-204ENST00000555737 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
RCCD1-204ENST00000555737 C5orf56Q8N8D9 126 aa13.39□□□□□ -0.27
RCCD1-204ENST00000555737 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
RCCD1-204ENST00000555737 RNASE3P12724 160 aaKnown RBP13.38□□□□□ -0.27
RCCD1-204ENST00000555737 KLK9Q9UKQ9 250 aa13.38□□□□□ -0.27
RCCD1-204ENST00000555737 K7ENP7 123 aa13.38□□□□□ -0.27
RCCD1-204ENST00000555737 MYO9AB2RTY4 2548 aa13.38□□□□□ -0.27
RCCD1-204ENST00000555737 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 SDHAF1A6NFY7 115 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 OOSP1A8MZH6 123 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 TCL1BO95988 128 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 CRYGDP07320 174 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 AJUBAQ96IF1 538 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 TLN2Q9Y4G6 2542 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 C11orf71Q6IPW1 123 aa13.37□□□□□ -0.27
RCCD1-204ENST00000555737 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
RCCD1-204ENST00000555737 TSHBP01222 138 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 HERVK_113P61574 105 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 SUMO4Q6EEV6 95 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 DUX5Q96PT3 197 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 USP9XQ93008 2570 aaPredicted RBP13.36□□□□□ -0.27
RCCD1-204ENST00000555737 FHL3Q13643 280 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
RCCD1-204ENST00000555737 PRSS2P07478 247 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 ZANQ9Y493 2812 aa13.36□□□□□ -0.27
RCCD1-204ENST00000555737 IGHV4-39P01824 125 aa13.35□□□□□ -0.27
RCCD1-204ENST00000555737 SHISA2Q6UWI4 295 aa13.35□□□□□ -0.27
RCCD1-204ENST00000555737 C1orf122Q6ZSJ8 110 aa13.35□□□□□ -0.27
RCCD1-204ENST00000555737 H3BUX3 64 aa13.35□□□□□ -0.27
RCCD1-204ENST00000555737 LGALS3P17931 250 aaKnown RBP13.35□□□□□ -0.27
RCCD1-204ENST00000555737 LY6DQ14210 128 aa13.35□□□□□ -0.27
RCCD1-204ENST00000555737 CFAP126Q5VTH2 177 aa13.35□□□□□ -0.27
RCCD1-204ENST00000555737 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
RCCD1-204ENST00000555737 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 WNK1Q9H4A3 2382 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 RNF223E7ERA6 249 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 ZNRF2Q8NHG8 242 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 C9JAW5 83 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 PRM2P04554 102 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 XGP55808 180 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 NDUFA11Q86Y39 141 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
RCCD1-204ENST00000555737 A0A0J9YY99 117 aa13.33□□□□□ -0.28
RCCD1-204ENST00000555737 ITLN2Q8WWU7 325 aaPredicted RBP13.33□□□□□ -0.28
RCCD1-204ENST00000555737 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.28
RCCD1-204ENST00000555737 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
RCCD1-204ENST00000555737 CRIP2P52943 208 aaPredicted RBP13.33□□□□□ -0.28
RCCD1-204ENST00000555737 PMVKQ15126 192 aa13.33□□□□□ -0.28
RCCD1-204ENST00000555737 PTPN13Q12923 2485 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 IGHV4-4A0A075B6R2 117 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 OVOL1O14753 267 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 CFC1BP0CG36 223 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 CFC1P0CG37 223 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 MOB4Q9Y3A3 225 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 LMO4P61968 165 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 CEMP1Q6PRD7 247 aaPredicted RBP13.32□□□□□ -0.28
RCCD1-204ENST00000555737 C10orf99Q6UWK7 81 aa13.32□□□□□ -0.28
RCCD1-204ENST00000555737 A4D1N5 150 aa13.31□□□□□ -0.28
RCCD1-204ENST00000555737 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
RCCD1-204ENST00000555737 SPXQ9BT56 116 aa13.31□□□□□ -0.28
RCCD1-204ENST00000555737 ANKRD29Q8N6D5 301 aa13.31□□□□□ -0.28
RCCD1-204ENST00000555737 U3KQE9 123 aa13.31□□□□□ -0.28
RCCD1-204ENST00000555737 J3QQQ9 107 aa13.3□□□□□ -0.28
RCCD1-204ENST00000555737 CARD19Q96LW7 228 aa13.3□□□□□ -0.28
RCCD1-204ENST00000555737 CDIP1Q9H305 208 aa13.3□□□□□ -0.28
RCCD1-204ENST00000555737 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
RCCD1-204ENST00000555737 KNCNA6PVL3 124 aa13.3□□□□□ -0.28
RCCD1-204ENST00000555737 A8MWV9 139 aa13.3□□□□□ -0.28
RCCD1-204ENST00000555737 A0A0J9YXV3 536 aa13.29□□□□□ -0.28
RCCD1-204ENST00000555737 COX6B1P14854 86 aa13.29□□□□□ -0.28
RCCD1-204ENST00000555737 MRPL53Q96EL3 112 aaKnown RBP13.29□□□□□ -0.28
RCCD1-204ENST00000555737 P0DMU3 169 aa13.29□□□□□ -0.28
RCCD1-204ENST00000555737 FAM231AP0DMU4 169 aa13.29□□□□□ -0.28
RCCD1-204ENST00000555737 FAM231CP0DMU5 169 aa13.29□□□□□ -0.28
RCCD1-204ENST00000555737 ACACBO00763 2458 aa13.29□□□□□ -0.28
RCCD1-204ENST00000555737 MYO18BQ8IUG5 2567 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 UBE2D1P51668 147 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 VCYO14598 125 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 ITPR1Q14643 2758 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 FLNCQ14315 2725 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 HIST2H2BDQ6DRA6 164 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 SS18L2Q9UHA2 77 aa13.28□□□□□ -0.28
RCCD1-204ENST00000555737 A8MZ25 164 aa13.27□□□□□ -0.28
RCCD1-204ENST00000555737 GATA3P23771 443 aa13.27□□□□□ -0.28
RCCD1-204ENST00000555737 Q6ZUT4 128 aa13.27□□□□□ -0.28
RCCD1-204ENST00000555737 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.28
RCCD1-204ENST00000555737 A0A0U1RRA0 63 aa13.27□□□□□ -0.29
RCCD1-204ENST00000555737 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 FBXL19-AS1Q494R0 122 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 NDUFA4O00483 81 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 IGHV3-30P01768 117 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 IGHV3-30-5P0DP03 117 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 ZNF876PQ49A33 203 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 Q6ZSV7 163 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms