RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 C11orf72Q8NBR9 251 aa6.84□□□□□ -1.31
ACTN1-215ENST00000555616 C9orf85Q96MD7 179 aa6.84□□□□□ -1.31
ACTN1-215ENST00000555616 GNB1LQ9BYB4 327 aa6.84□□□□□ -1.31
ACTN1-215ENST00000555616 CNFNQ9BYD5 112 aa6.84□□□□□ -1.31
ACTN1-215ENST00000555616 SCRT2Q9NQ03 307 aa6.84□□□□□ -1.31
ACTN1-215ENST00000555616 GSN-AS1Q9NRJ2 163 aa6.84□□□□□ -1.31
ACTN1-215ENST00000555616 M0R2P5 195 aa6.83□□□□□ -1.32
ACTN1-215ENST00000555616 M0R381 172 aa6.83□□□□□ -1.32
ACTN1-215ENST00000555616 PHOX2AO14813 284 aa6.83□□□□□ -1.32
ACTN1-215ENST00000555616 PRM2P04554 102 aa6.83□□□□□ -1.32
ACTN1-215ENST00000555616 DAZ2Q13117 558 aaKnown RBP6.83□□□□□ -1.32
ACTN1-215ENST00000555616 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
ACTN1-215ENST00000555616 TRAPPC1Q9Y5R8 145 aa6.83□□□□□ -1.32
ACTN1-215ENST00000555616 PLAC8L1A1L4L8 177 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 SPINK4O60575 86 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 NXPH4O95158 308 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 HLA-DQA1P01909 254 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 S100A6P06703 90 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 HBBP68871 147 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 TWIST1Q15672 202 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 ZNF876PQ49A33 203 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 PIK3CD-AS1Q5SR53 167 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 MRPL54Q6P161 138 aaKnown RBP6.82□□□□□ -1.32
ACTN1-215ENST00000555616 SMIM15Q7Z3B0 74 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 PTH2Q96A98 100 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 NDUFAF3Q9BU61 184 aa6.82□□□□□ -1.32
ACTN1-215ENST00000555616 TRGV1A0A0A0MS02 117 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 MUC21A0A0G2JKD1 596 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 MUC21A0A140T8X8 626 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 LYRM9A8MSI8 78 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 TRGC1P0CF51 173 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 NTF3P20783 257 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 SSTP61278 116 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
ACTN1-215ENST00000555616 TMEM136Q6ZRR5 245 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 FRZBQ92765 325 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 AP1S3Q96PC3 154 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
ACTN1-215ENST00000555616 NOP10Q9NPE3 64 aaKnown RBP6.81□□□□□ -1.32
ACTN1-215ENST00000555616 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
ACTN1-215ENST00000555616 LOC105371267A0A1B0GV96 52 aa6.8□□□□□ -1.32
ACTN1-215ENST00000555616 SMIM17P0DL12 118 aa6.8□□□□□ -1.32
ACTN1-215ENST00000555616 CAMPP49913 170 aa6.8□□□□□ -1.32
ACTN1-215ENST00000555616 RAB4BP61018 213 aa6.8□□□□□ -1.32
ACTN1-215ENST00000555616 DMRTA1Q5VZB9 504 aa6.8□□□□□ -1.32
ACTN1-215ENST00000555616 MRPL16Q9NX20 251 aaKnown RBP6.8□□□□□ -1.32
ACTN1-215ENST00000555616 A8MWV9 139 aa6.79□□□□□ -1.32
ACTN1-215ENST00000555616 DAD1P61803 113 aa6.79□□□□□ -1.32
ACTN1-215ENST00000555616 RASL10AQ92737 203 aa6.79□□□□□ -1.32
ACTN1-215ENST00000555616 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 C5orf52A6NGY3 159 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 APCSP02743 223 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 P0DMU3 169 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 FAM231AP0DMU4 169 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 FAM231CP0DMU5 169 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 Q6ZTI0 123 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 TMEM191AQ9H0A3 160 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
ACTN1-215ENST00000555616 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 RHODO00212 210 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 GAGE7O76087 117 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 GAGE12FP0CL80 117 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 GAGE12GP0CL81 117 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 GAGE12IP0CL82 117 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 DEFB130BP0DP73 79 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 DEFB130AP0DP74 79 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 HTN3P15516 51 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 EVI2AP22794 236 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 NDUFA6P56556 154 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
ACTN1-215ENST00000555616 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
ACTN1-215ENST00000555616 LINC00612Q8N6U2 182 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 C14orf178Q8N769 122 aaPredicted RBP6.77□□□□□ -1.33
ACTN1-215ENST00000555616 DPH3P1Q9H4G8 78 aa6.77□□□□□ -1.33
ACTN1-215ENST00000555616 A0A087WWL8 130 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 TRAV4A0A0B4J268 109 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 RS1O15537 224 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 CIDEAO60543 219 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 FAM74A4Q5TZK3 123 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 CFAP126Q5VTH2 177 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 ZFP2Q6ZN57 461 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 POM121L12Q8N7R1 296 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 C18orf15Q96N68 181 aa6.76□□□□□ -1.33
ACTN1-215ENST00000555616 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms