RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 GAGE5Q13069 117 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 GAGE6Q13070 117 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 VMO1Q7Z5L0 202 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 FAM57AQ8TBR7 257 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 SPXQ9BT56 116 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 ASIPP42127 132 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 ZNF56Q15929 161 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 METTL26Q96S19 204 aa6.74□□□□□ -1.33
SYNE2-217ENST00000555022 CD7P09564 240 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 ORMDL2Q53FV1 153 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 ZNRF2Q8NHG8 242 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 CHCHD5Q9BSY4 110 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 SPTBN4Q9H254 2564 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 TRAV8-3A0A0A6YYJ7 113 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 TNFRSF13BO14836 293 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-217ENST00000555022 TSHBP01222 138 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 CRYGDP07320 174 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 NHLRC4P0CG21 123 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-217ENST00000555022 TAL2Q16559 108 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 PRO1854Q9UHT4 67 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 MUC4Q99102 2169 aa6.73□□□□□ -1.33
SYNE2-217ENST00000555022 A0A0J9YXV3 536 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 KLK9Q9UKQ9 250 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 KNCNA6PVL3 124 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 J3QQQ9 107 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-217ENST00000555022 Q8N1Y9 231 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 TOMM6Q96B49 74 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 COL27A1Q8IZC6 1860 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-217ENST00000555022 UBE2D1P51668 147 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 NDUFV3P56181 108 aaKnown RBP6.72□□□□□ -1.33
SYNE2-217ENST00000555022 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
SYNE2-217ENST00000555022 HIST2H2BDQ6DRA6 164 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 BRD3OSQ6XYD6 125 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 TIMD4Q96H15 378 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
SYNE2-217ENST00000555022 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.33
SYNE2-217ENST00000555022 P0DMU3 169 aa6.71□□□□□ -1.33
SYNE2-217ENST00000555022 FAM231AP0DMU4 169 aa6.71□□□□□ -1.33
SYNE2-217ENST00000555022 FAM231CP0DMU5 169 aa6.71□□□□□ -1.33
SYNE2-217ENST00000555022 USP9XQ93008 2570 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-217ENST00000555022 IGLV4-69A0A075B6H9 119 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 LY6LH3BQJ8 138 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 CDSNQ15517 529 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 ZFAND3Q9H8U3 227 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 VPS13CQ709C8 3753 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 IGHV3-30P01768 117 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 IGHV3-30-5P0DP03 117 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 ZFP36P26651 326 aaKnown RBP6.71□□□□□ -1.34
SYNE2-217ENST00000555022 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 EEF1AKMT3Q96AZ1 226 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 SLC50A1Q9BRV3 221 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 BSNQ9UPA5 3926 aa6.71□□□□□ -1.34
SYNE2-217ENST00000555022 TRBV7-9A0A0J9YWB2 115 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 TMEM262E9PQX1 116 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 CCL21O00585 134 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 ZNF883P0CG24 379 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 UBE2D3P61077 147 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 UBE2D2P62837 147 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 MEIG1Q5JSS6 88 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 GAGE12JA6NER3 117 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 GAGE7O76087 117 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 GAGE12FP0CL80 117 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 GAGE12GP0CL81 117 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 GAGE12IP0CL82 117 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 GAGE4Q13068 117 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 SUMO4Q6EEV6 95 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 C2orf82Q6UX34 121 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 PIFOQ8TCI5 191 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 CNFNQ9BYD5 112 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 KAAG1Q9UBP8 84 aa6.7□□□□□ -1.34
SYNE2-217ENST00000555022 PRRC2AP48634 2157 aaKnown RBP6.69□□□□□ -1.34
SYNE2-217ENST00000555022 COX6B1P14854 86 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 HIVEP3Q5T1R4 2406 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 IFITM1P13164 125 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 IGFL2Q6UWQ7 119 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 DUX5Q96PT3 197 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 PMVKQ15126 192 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 Q6ZS92 163 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 C8orf31Q8N9H6 132 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 Q8N9W7 124 aa6.69□□□□□ -1.34
SYNE2-217ENST00000555022 IGHV3-38A0A0C4DH36 116 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 RNF223E7ERA6 249 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 TRIAP1O43715 76 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 ZNF22P17026 224 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-217ENST00000555022 RPL32P62910 135 aaKnown RBP6.68□□□□□ -1.34
SYNE2-217ENST00000555022 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 KLK5Q9Y337 293 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-217ENST00000555022 ZANQ9Y493 2812 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 SAA4P35542 130 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 PROK1P58294 105 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 FOXC1Q12948 553 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 LINC01620Q4KN68 170 aa6.68□□□□□ -1.34
SYNE2-217ENST00000555022 ZFAND2AQ8N6M9 145 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms