RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 H3BT86 120 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 IGHV3-23P01764 117 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 TSPEAR-AS2P59090 65 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 IGFL4Q6B9Z1 124 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 SPTBN2O15020 2390 aa11.89□□□□□ -0.51
SYNE3-203ENST00000554873 IGLV4-69A0A075B6H9 119 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 RPS28P62857 69 aaKnown RBP11.88□□□□□ -0.51
SYNE3-203ENST00000554873 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 IGHV7-4-1A0A0J9YVY3 117 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 TRBV30A0A0K0K1B3 111 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 CRYGDP07320 174 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 TMEM170BQ5T4T1 132 aa11.88□□□□□ -0.51
SYNE3-203ENST00000554873 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.87□□□□□ -0.51
SYNE3-203ENST00000554873 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 AMELXQ99217 191 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 LY6HO94772 140 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 RBAKDNA6NC62 111 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 NDPQ00604 133 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
SYNE3-203ENST00000554873 ZFHX2Q9C0A1 2572 aaPredicted RBP11.86□□□□□ -0.51
SYNE3-203ENST00000554873 H7C423 109 aa11.86□□□□□ -0.51
SYNE3-203ENST00000554873 DYNAPQ8N1N2 210 aa11.86□□□□□ -0.51
SYNE3-203ENST00000554873 C11orf21Q9P2W6 132 aa11.86□□□□□ -0.51
SYNE3-203ENST00000554873 TMEM219Q86XT9 240 aa11.86□□□□□ -0.51
SYNE3-203ENST00000554873 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
SYNE3-203ENST00000554873 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
SYNE3-203ENST00000554873 BEX4Q9NWD9 120 aaPredicted RBP11.86□□□□□ -0.51
SYNE3-203ENST00000554873 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
SYNE3-203ENST00000554873 J3QQQ9 107 aa11.85□□□□□ -0.51
SYNE3-203ENST00000554873 TRIAP1O43715 76 aa11.85□□□□□ -0.51
SYNE3-203ENST00000554873 ATP5G1P05496 136 aa11.85□□□□□ -0.51
SYNE3-203ENST00000554873 LGALS3P17931 250 aaKnown RBP11.85□□□□□ -0.51
SYNE3-203ENST00000554873 CTSGP08311 255 aa11.84□□□□□ -0.51
SYNE3-203ENST00000554873 KLK5Q9Y337 293 aaPredicted RBP11.84□□□□□ -0.51
SYNE3-203ENST00000554873 ANKHD1Q8IWZ3 2542 aaKnown RBP11.84□□□□□ -0.51
SYNE3-203ENST00000554873 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
SYNE3-203ENST00000554873 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.52
SYNE3-203ENST00000554873 METTL26Q96S19 204 aa11.83□□□□□ -0.52
SYNE3-203ENST00000554873 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
SYNE3-203ENST00000554873 TLN1Q9Y490 2541 aaKnown RBP11.83□□□□□ -0.52
SYNE3-203ENST00000554873 IGHV3-35A0A0C4DH35 117 aa11.82□□□□□ -0.52
SYNE3-203ENST00000554873 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
SYNE3-203ENST00000554873 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
SYNE3-203ENST00000554873 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
SYNE3-203ENST00000554873 ACYP1P07311 99 aa11.82□□□□□ -0.52
SYNE3-203ENST00000554873 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
SYNE3-203ENST00000554873 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
SYNE3-203ENST00000554873 RPL39LQ96EH5 51 aaKnown RBP11.82□□□□□ -0.52
SYNE3-203ENST00000554873 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
SYNE3-203ENST00000554873 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
SYNE3-203ENST00000554873 TSHBP01222 138 aa11.81□□□□□ -0.52
SYNE3-203ENST00000554873 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
SYNE3-203ENST00000554873 GAGE2AQ6NT46 116 aa11.8□□□□□ -0.52
SYNE3-203ENST00000554873 CACNA1BQ00975 2339 aa11.8□□□□□ -0.52
SYNE3-203ENST00000554873 COX7CP15954 63 aa11.8□□□□□ -0.52
SYNE3-203ENST00000554873 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 M0R1W7 72 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 IGIPA6NJ69 53 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 M0R381 172 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 COX6CP09669 75 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 CRYGAP11844 174 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 Q8N6K4 173 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
SYNE3-203ENST00000554873 RELNP78509 3460 aa11.79□□□□□ -0.52
SYNE3-203ENST00000554873 ICOSQ9Y6W8 199 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 VMO1Q7Z5L0 202 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 ZNRF2Q8NHG8 242 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 TMEM141Q96I45 108 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 LEPROTO15243 131 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 RNF182Q8N6D2 247 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 DPH3P1Q9H4G8 78 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
SYNE3-203ENST00000554873 AGPAT4-IT1Q9H0P7 198 aa11.77□□□□□ -0.53
SYNE3-203ENST00000554873 PPP1R17O96001 155 aa11.77□□□□□ -0.53
SYNE3-203ENST00000554873 MSRB2Q9Y3D2 182 aa11.77□□□□□ -0.53
SYNE3-203ENST00000554873 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
SYNE3-203ENST00000554873 SVEP1Q4LDE5 3571 aa11.76□□□□□ -0.53
SYNE3-203ENST00000554873 SPTA1P02549 2419 aa11.76□□□□□ -0.53
SYNE3-203ENST00000554873 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-203ENST00000554873 NBASA2RRP1 2371 aa11.75□□□□□ -0.53
SYNE3-203ENST00000554873 LST1O00453 97 aa11.75□□□□□ -0.53
SYNE3-203ENST00000554873 BUB3O43684 328 aa11.75□□□□□ -0.53
SYNE3-203ENST00000554873 UBE2E1P51965 193 aa11.75□□□□□ -0.53
SYNE3-203ENST00000554873 IGHV3-66A0A0C4DH42 116 aa11.75□□□□□ -0.53
SYNE3-203ENST00000554873 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
SYNE3-203ENST00000554873 C15orf32Q32M92 178 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 C2orf48Q96LS8 159 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 ZFAND3Q9H8U3 227 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 A0A0J9YX75 114 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 CXCL5P42830 114 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 Q8N9W7 124 aa11.74□□□□□ -0.53
SYNE3-203ENST00000554873 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 F5H768 121 aa11.73□□□□□ -0.53
SYNE3-203ENST00000554873 MGPP08493 103 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms