RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 TRAV9-1A0A075B6T8 112 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 A0A087WWC5 75 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 A0A1B0GUT8 65 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 F5H768 121 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 GZMBP10144 247 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 RIGQ13278 110 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 CFAP126Q5VTH2 177 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 DMRTA1Q5VZB9 504 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 KCNIP4Q6PIL6 250 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 ATP5L2Q7Z4Y8 100 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 FRZBQ92765 325 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 BTF3L4Q96K17 158 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 TPPP3Q9BW30 176 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
LINC01397-201ENST00000554808 TRBV6-4A0A1B0GX49 114 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 H7C1H1 209 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 APOC3P02656 99 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 HTN3P15516 51 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 NTF3P20783 257 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 RHOHQ15669 191 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 CASC10Q5T4H9 136 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 SH2D6Q7Z4S9 175 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 GTSF1Q8WW33 167 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 HHLA3Q9XRX5 114 aa5.68□□□□□ -1.5
LINC01397-201ENST00000554808 TRBV10-1A0A0K0K1A3 114 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 IGLL5B9A064 214 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 PAX4O43316 350 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
LINC01397-201ENST00000554808 S100PP25815 95 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 RAB4BP61018 213 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 FHL2Q14192 279 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 TWIST1Q15672 202 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 FAM74A4Q5TZK3 123 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 RASL11AQ6T310 242 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 POM121L12Q8N7R1 296 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 ZNF479Q96JC4 524 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 PRADC1Q9BSG0 188 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 ICOSQ9Y6W8 199 aa5.67□□□□□ -1.5
LINC01397-201ENST00000554808 K7EQD1 137 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 IGHV3-53P01767 116 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 CRYGDP07320 174 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 HOXA5P20719 270 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 CRYBA4P53673 196 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 ZNF56Q15929 161 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 MRPL23Q16540 153 aaKnown RBP5.66□□□□□ -1.5
LINC01397-201ENST00000554808 UFSP1Q6NVU6 142 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.66□□□□□ -1.5
LINC01397-201ENST00000554808 TMEM191AQ9H0A3 160 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 RPS10P5Q9NQ39 176 aa5.66□□□□□ -1.5
LINC01397-201ENST00000554808 PLECQ15149 4684 aaKnown RBP5.66□□□□□ -1.5
LINC01397-201ENST00000554808 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 C7orf77A4D0Y5 90 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 P0DMU3 169 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 FAM231AP0DMU4 169 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 FAM231CP0DMU5 169 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 HBBP68871 147 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 COX19Q49B96 90 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 ZFAND6Q6FIF0 208 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 TMEM88Q6PEY1 159 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 SLC7A5P1Q8MH63 180 aa5.65□□□□□ -1.5
LINC01397-201ENST00000554808 C14orf178Q8N769 122 aaPredicted RBP5.65□□□□□ -1.5
LINC01397-201ENST00000554808 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 A0A087WWL8 130 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 F5H697 171 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 PPP1R17O96001 155 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 EVI2AP22794 236 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 SRIP30626 198 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 RPL36AP83881 106 aaKnown RBP5.64□□□□□ -1.51
LINC01397-201ENST00000554808 SLC25A29Q8N8R3 303 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 GATD1Q8NB37 220 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 RPL36ALQ969Q0 106 aaKnown RBP5.64□□□□□ -1.51
LINC01397-201ENST00000554808 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 JPT2Q9H910 190 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
LINC01397-201ENST00000554808 FRAS1Q86XX4 4008 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 MUC21A0A0G2JKD1 596 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 MUC21A0A140T8X8 626 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 A0A1B0GXF2 115 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 NUDT3O95989 172 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 MGPP08493 103 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 GYPEP15421 78 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 CCL18P55774 89 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 FAM3BP58499 235 aaPredicted RBP5.63□□□□□ -1.51
LINC01397-201ENST00000554808 SSTP61278 116 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 NEGR1Q7Z3B1 354 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 MRAP2Q96G30 205 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 VSIG2Q96IQ7 327 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 SAMD10Q9BYL1 202 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 MSRB1Q9NZV6 116 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 APLNQ9ULZ1 77 aa5.63□□□□□ -1.51
LINC01397-201ENST00000554808 A0A096LPF7 62 aa5.62□□□□□ -1.51
LINC01397-201ENST00000554808 A0A0J9YY99 117 aa5.62□□□□□ -1.51
LINC01397-201ENST00000554808 PPBPP02775 128 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms