RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PGLYRP4Q96LB8 373 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
SHMT2-215ENST00000554656 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BKO60814 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 ZNF324O75467 553 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-215ENST00000554656 INSP01308 110 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BJP06899 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BOP23527 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BBP33778 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 RNASE4P34096 147 aaKnown RBP7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BDP58876 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BCP62807 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 CACNG7P62955 275 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST2H2BEQ16778 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-215ENST00000554656 LYZL1Q6UWQ5 148 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 ZNF493Q6ZR52 646 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 FRZBQ92765 325 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BHQ93079 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BNQ99877 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HIST1H2BMQ99879 126 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 TMEM208Q9BTX3 173 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
SHMT2-215ENST00000554656 HSPG2P98160 4391 aa7.41□□□□□ -1.22
SHMT2-215ENST00000554656 TMSB15BA0A087X1C1 80 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 LYRM9A8MSI8 78 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 TRGC1P0CF51 173 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 ASIPP42127 132 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 GFI1BQ5VTD9 330 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 FAM159AQ6UWV7 190 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 LINC00467Q9BRT7 94 aa7.4□□□□□ -1.22
SHMT2-215ENST00000554656 ABCA13Q86UQ4 5058 aa7.4□□□□□ -1.23
SHMT2-215ENST00000554656 IGHV1OR15-1A0A075B7D0 117 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 GRIFINA4D1Z8 144 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 SPINK4O60575 86 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 S100A6P06703 90 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 DEFB130BP0DP73 79 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 DEFB130AP0DP74 79 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 RAB4BP61018 213 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 TNP2Q05952 138 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
SHMT2-215ENST00000554656 ZNRF2Q8NHG8 242 aa7.39□□□□□ -1.23
SHMT2-215ENST00000554656 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 J3KRW8 73 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 APCSP02743 223 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 S100A4P26447 101 aaKnown RBP7.38□□□□□ -1.23
SHMT2-215ENST00000554656 CAMPP49913 170 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 KIR3DS1Q14943 382 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 ZFP82Q8N141 532 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 TMEM256Q8N2U0 113 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 TMEM191AQ9H0A3 160 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 SCRT2Q9NQ03 307 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 TP53TG3Q9ULZ0 132 aa7.38□□□□□ -1.23
SHMT2-215ENST00000554656 C5orf52A6NGY3 159 aa7.37□□□□□ -1.23
SHMT2-215ENST00000554656 F5H768 121 aa7.37□□□□□ -1.23
SHMT2-215ENST00000554656 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
SHMT2-215ENST00000554656 NAGKQ9UJ70 344 aa7.37□□□□□ -1.23
SHMT2-215ENST00000554656 NBDYA0A0U1RRE5 68 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 NXPH4O95158 308 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 NUDT3O95989 172 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 NTF3P20783 257 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 Q0VG73 95 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 SLAQ13239 276 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 OR10J3Q5JRS4 329 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 MUC21Q5SSG8 566 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 Q6ZQT7 251 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 RNASE8Q8TDE3 154 aaKnown RBP7.36□□□□□ -1.23
SHMT2-215ENST00000554656 LINC01587Q99440 93 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 LINC00588Q9Y4M8 146 aa7.36□□□□□ -1.23
SHMT2-215ENST00000554656 CBY3A6NI87 242 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 H3BVH4 76 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 ATP5G1P05496 136 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
SHMT2-215ENST00000554656 HOXA5P20719 270 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 TWIST1Q15672 202 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 PIK3CD-AS1Q5SR53 167 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 FAM104BQ5XKR9 115 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 OR10AG1Q8NH19 301 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 PTH2Q96A98 100 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 C16orf74Q96GX8 76 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 KRTAP1-5Q9BYS1 174 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 PHLDA3Q9Y5J5 127 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 LRP1BQ9NZR2 4599 aa7.35□□□□□ -1.23
SHMT2-215ENST00000554656 IGHV3-16A0A0C4DH30 117 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 LOC105371267A0A1B0GV96 52 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 C16orf90A8MZG2 172 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 GNRH2O43555 120 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 PPBPP02775 128 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 HTN1P15515 57 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms