RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 LINC01556Q5JQF7 62 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 EIF5AL1Q6IS14 154 aaKnown RBP7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 UFSP1Q6NVU6 142 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 TCTE3Q8IZS6 198 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 MSRB1Q9NZV6 116 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 HSPG2P98160 4391 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 IGHV3-73A0A0B4J1V6 119 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 M0R036 132 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 CRYGDP07320 174 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 CXCL1P09341 107 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 ARMS2P0C7Q2 107 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 LINC00694P0DN24 101 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 LELP1Q5T871 98 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 ATP6V0E2Q8NHE4 81 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 MLST8Q9BVC4 326 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 GTSF1LQ9H1H1 148 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 MANBALQ9NQG1 85 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
PTCD2P1-201ENST00000554393 A0A1B0GV50 99 aa7.03□□□□□ -1.28
PTCD2P1-201ENST00000554393 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
PTCD2P1-201ENST00000554393 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
PTCD2P1-201ENST00000554393 OR10J3Q5JRS4 329 aa7.03□□□□□ -1.28
PTCD2P1-201ENST00000554393 Q6ZSN1 163 aa7.03□□□□□ -1.28
PTCD2P1-201ENST00000554393 ZFP82Q8N141 532 aa7.03□□□□□ -1.28
PTCD2P1-201ENST00000554393 GRIFINA4D1Z8 144 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 IBA57-AS1B1ANH7 110 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 BAGE2Q86Y30 109 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 C11orf52Q96A22 123 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 SFRP2Q96HF1 295 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 SAMD10Q9BYL1 202 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 JPT2Q9H910 190 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 TNFRSF18Q9Y5U5 241 aa7.02□□□□□ -1.29
PTCD2P1-201ENST00000554393 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 A0A087WTM6 91 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 A0A087WWC5 75 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 M0R381 172 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 C1QBP02746 253 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 SULT1A2P50226 295 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 LAGE3Q14657 143 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
PTCD2P1-201ENST00000554393 TRBV10-1A0A0K0K1A3 114 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 GAGE12JA6NER3 117 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 RPL35P42766 123 aaKnown RBP7□□□□□ -1.29
PTCD2P1-201ENST00000554393 GAGE1Q13065 139 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 GAGE4Q13068 117 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 GAGE5Q13069 117 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 GAGE13Q4V321 117 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 Q6ZNX1 250 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 SLC51BQ86UW2 128 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 C14orf178Q8N769 122 aaPredicted RBP7□□□□□ -1.29
PTCD2P1-201ENST00000554393 SMIM12Q96EX1 92 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
PTCD2P1-201ENST00000554393 SNAI2O43623 268 aa6.99□□□□□ -1.29
PTCD2P1-201ENST00000554393 IFNA1P01562 189 aa6.99□□□□□ -1.29
PTCD2P1-201ENST00000554393 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
PTCD2P1-201ENST00000554393 CCL20P78556 96 aa6.99□□□□□ -1.29
PTCD2P1-201ENST00000554393 FAM74A4Q5TZK3 123 aa6.99□□□□□ -1.29
PTCD2P1-201ENST00000554393 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 DMBT1Q9UGM3 2413 aaPredicted RBP6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 A0A087WWL8 130 aa6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 PDE6DO43924 150 aa6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 TAGLN2P37802 199 aaKnown RBP6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 RPL19P84098 196 aaKnown RBP6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 MEF2BQ02080 365 aaPredicted RBP6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 OR10AG1Q8NH19 301 aa6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 DERL1Q9BUN8 251 aa6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 Q9UF83 564 aa6.98□□□□□ -1.29
PTCD2P1-201ENST00000554393 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 PSCAO43653 123 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 RAB4BP61018 213 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 RPL36AP83881 106 aaKnown RBP6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 CENPWQ5EE01 88 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 TOR2AQ5JU69 321 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 PRR27Q6MZM9 219 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 AKAP14Q86UN6 197 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 OR10G8Q8NGN5 311 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
PTCD2P1-201ENST00000554393 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 LRCOL1A6NCL2 159 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 IGLV2-8P01709 118 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 BCL2P10415 239 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 GNG4P50150 75 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 RPS20P60866 119 aaKnown RBP6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 UBE2D3P61077 147 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 UBE2D2P62837 147 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 MAPKAPK5-AS1Q8N8E1 139 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
PTCD2P1-201ENST00000554393 Q9HAA7 133 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms