RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SNCGO76070 127 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 ADORA2A-AS1P86434 159 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 MGPP08493 103 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 Q8N6K4 173 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 RAX2Q96IS3 184 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 C16orf92Q96LL3 132 aa12.81□□□□□ -0.36
PPP4R3A-202ENST00000554390 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 GAGE7O76087 117 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 EDN2P20800 178 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 GAGE4Q13068 117 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 SHISA2Q6UWI4 295 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 TRBV7-9A0A0J9YWB2 115 aa12.8□□□□□ -0.36
PPP4R3A-202ENST00000554390 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 IGLV4-69A0A075B6H9 119 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 M0R1W7 72 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 ASIPP42127 132 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 TSPEAR-AS2P59090 65 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 HERVK_113P61574 105 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 LY6EQ16553 131 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
PPP4R3A-202ENST00000554390 GNRH2O43555 120 aa12.78□□□□□ -0.36
PPP4R3A-202ENST00000554390 IFITM1P13164 125 aa12.78□□□□□ -0.36
PPP4R3A-202ENST00000554390 HERV-K104P63124 156 aa12.78□□□□□ -0.36
PPP4R3A-202ENST00000554390 BPESC1Q9GZL8 116 aa12.78□□□□□ -0.36
PPP4R3A-202ENST00000554390 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
PPP4R3A-202ENST00000554390 JPT2Q9H910 190 aa12.78□□□□□ -0.36
PPP4R3A-202ENST00000554390 TLN2Q9Y4G6 2542 aa12.77□□□□□ -0.36
PPP4R3A-202ENST00000554390 TSHBP01222 138 aa12.77□□□□□ -0.36
PPP4R3A-202ENST00000554390 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.36
PPP4R3A-202ENST00000554390 SMIM20Q8N5G0 67 aa12.77□□□□□ -0.36
PPP4R3A-202ENST00000554390 H7C2G1 150 aa12.77□□□□□ -0.37
PPP4R3A-202ENST00000554390 NTN5Q8WTR8 489 aaPredicted RBP12.77□□□□□ -0.37
PPP4R3A-202ENST00000554390 Q8N1Y9 231 aa12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 MUC4Q99102 2169 aa12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 C9orf47Q6ZRZ4 202 aa12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 METTL26Q96S19 204 aa12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 C2CD3Q4AC94 2353 aa12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
PPP4R3A-202ENST00000554390 K7ENP7 123 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 TMEM170BQ5T4T1 132 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 CACNA1AO00555 2505 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 A4D1N5 150 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 ARL3P36405 182 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 CENPVL3A0A0U1RRI6 287 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 EIF4EBP3O60516 100 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 RPL32P62910 135 aaKnown RBP12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 FAM110AQ9BQ89 295 aa12.75□□□□□ -0.37
PPP4R3A-202ENST00000554390 MYO9AB2RTY4 2548 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 M0QXV9 152 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 IGKV3-20P01619 116 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 C11orf71Q6IPW1 123 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 PHLDA3Q9Y5J5 127 aa12.74□□□□□ -0.37
PPP4R3A-202ENST00000554390 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
PPP4R3A-202ENST00000554390 PMVKQ15126 192 aa12.73□□□□□ -0.37
PPP4R3A-202ENST00000554390 AMELXQ99217 191 aa12.73□□□□□ -0.37
PPP4R3A-202ENST00000554390 FAM159AQ6UWV7 190 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 GPHB5Q86YW7 130 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 TEX49A0A1B0GTD5 131 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 IGIPA6NJ69 53 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 ELANEP08246 267 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 A0A087WWL8 130 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 J3QQQ9 107 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 TMEM263Q8WUH6 116 aaKnown RBP12.72□□□□□ -0.37
PPP4R3A-202ENST00000554390 FAM208BQ5VWN6 2430 aa12.71□□□□□ -0.37
PPP4R3A-202ENST00000554390 Q6Q795 121 aa12.71□□□□□ -0.37
PPP4R3A-202ENST00000554390 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
PPP4R3A-202ENST00000554390 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
PPP4R3A-202ENST00000554390 IGHV4-39P01824 125 aa12.71□□□□□ -0.38
PPP4R3A-202ENST00000554390 LGALS3P17931 250 aaKnown RBP12.71□□□□□ -0.38
PPP4R3A-202ENST00000554390 EEF1AKMT3Q96AZ1 226 aa12.71□□□□□ -0.38
PPP4R3A-202ENST00000554390 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 LY6DQ14210 128 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 EBI3Q14213 229 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 LINC01620Q4KN68 170 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
PPP4R3A-202ENST00000554390 MXRA5Q9NR99 2828 aa12.69□□□□□ -0.38
PPP4R3A-202ENST00000554390 TRAV2A0A0B4J234 112 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms