RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 EBI3Q14213 229 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 Q6ZS49 121 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 C2orf91Q6ZV80 131 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 C6orf201Q7Z4U5 140 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 VN1R4Q7Z5H5 301 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 LHFPL1Q86WI0 220 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 MSRB3Q8IXL7 192 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 CEND1Q8N111 149 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 RPS4Y2Q8TD47 263 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 TSKUQ8WUA8 353 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 FMC1Q96HJ9 113 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 IL36BQ9NZH7 164 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 DYSFO75923 2080 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 HEATR5BQ9P2D3 2071 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV2A0A0B4J234 112 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV8-2A0A0B4J237 113 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV8-4A0A0B4J246 113 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV4A0A0B4J268 109 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 CEBPZOSA8MTT3 80 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 IGLL5B9A064 214 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 C4orf51C9J302 202 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 M0R129 80 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 PDCD6O75340 191 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 NUDT14O95848 222 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 CD55P08174 381 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 FKBP2P26885 142 aaKnown RBP3.22□□□□□ -1.89
ATXN3-225ENST00000554214 CXCL5P42830 114 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 FBXW4P57775 412 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 NPC2P61916 151 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 CCL20P78556 96 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 SERF2P84101 59 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 DEFB134Q4QY38 66 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 C2orf66Q6UXQ4 117 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 Q6ZRU5 148 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 SBSPONQ8IVN8 264 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 OR5AS1Q8N127 324 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 H1FXQ92522 213 aaKnown RBP3.22□□□□□ -1.89
ATXN3-225ENST00000554214 SHANK2-AS3Q9BTD1 123 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 PARP12Q9H0J9 701 aaKnown RBP3.22□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF286AQ9HBT8 521 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 KCNE3Q9Y6H6 103 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 LY96Q9Y6Y9 160 aa3.22□□□□□ -1.89
ATXN3-225ENST00000554214 USF3Q68DE3 2245 aa3.21□□□□□ -1.89
ATXN3-225ENST00000554214 RBAKDNA6NC62 111 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 IZUMO1RA6ND01 250 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 C2orf70A6NJV1 201 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 PGLYRP1O75594 196 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-225ENST00000554214 NDUFB2O95178 105 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 CPSF4O95639 269 aaKnown RBP3.21□□□□□ -1.9
ATXN3-225ENST00000554214 EPPINO95925 133 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 OXTP01178 125 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 IGKCP01834 107 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 HLA-DRB4P13762 266 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 INSL3P51460 131 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 UBE2L3P68036 154 aaKnown RBP3.21□□□□□ -1.9
ATXN3-225ENST00000554214 FBXL19-AS1Q494R0 122 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 Q6P435 159 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 HMGN2P46Q86SG4 172 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 PRR15Q8IV56 129 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 EEF1AKMT3Q96AZ1 226 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 CARD19Q96LW7 228 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 LINC01600Q96MT4 127 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 NMNAT3Q96T66 252 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 PROK2Q9HC23 129 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 CKLFQ9UBR5 152 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 RPUSD1Q9UJJ7 312 aaKnown RBP3.21□□□□□ -1.9
ATXN3-225ENST00000554214 HLA-DRB4X5D2U9 266 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.21□□□□□ -1.94e-12■■■□□ 18.3
ATXN3-225ENST00000554214 MED12Q93074 2177 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 MGAM2Q2M2H8 2515 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 ABCA1O95477 2261 aa3.21□□□□□ -1.9
ATXN3-225ENST00000554214 NINQ8N4C6 2090 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 RYR3Q15413 4870 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 H3BT86 120 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 J3QRE1 110 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 CD7P09564 240 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 RPL30P62888 115 aaKnown RBP3.2□□□□□ -1.9
ATXN3-225ENST00000554214 QRFPP83859 136 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 LGALS9BQ3B8N2 356 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 EBLN2Q6P2I7 272 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 SCGB1D4Q6XE38 83 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 RNF182Q8N6D2 247 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 NT5CQ8TCD5 201 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 BRK1Q8WUW1 75 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 PRSS27Q9BQR3 290 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 HDHD3Q9BSH5 251 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-225ENST00000554214 SRXN1Q9BYN0 137 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 AICDAQ9GZX7 198 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 DAZ1Q9NQZ3 744 aaKnown RBP3.2□□□□□ -1.9
ATXN3-225ENST00000554214 PCTPQ9UKL6 214 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 OARD1Q9Y530 152 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 HILPDAQ9Y5L2 63 aa3.2□□□□□ -1.9
ATXN3-225ENST00000554214 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 IGKV3D-11A0A0A0MRZ8 115 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 NCBP2LA6PVI3 153 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms