RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 RPS20P60866 119 aaKnown RBP4.47□□□□□ -1.69
SLIRP-203ENST00000554074 IFITM2Q01629 132 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 TOR2AQ5JU69 321 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 DAZAP1Q96EP5 407 aaKnown RBP4.47□□□□□ -1.69
SLIRP-203ENST00000554074 C9orf85Q96MD7 179 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 SCRT2Q9NQ03 307 aa4.47□□□□□ -1.69
SLIRP-203ENST00000554074 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
SLIRP-203ENST00000554074 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 RS1O15537 224 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 CRYGDP07320 174 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 SRP19P09132 144 aaKnown RBP4.46□□□□□ -1.7
SLIRP-203ENST00000554074 ZNF80P51504 273 aaPredicted RBP4.46□□□□□ -1.7
SLIRP-203ENST00000554074 RHOHQ15669 191 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 CENPWQ5EE01 88 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 LINC01556Q5JQF7 62 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 CFAP126Q5VTH2 177 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 ZC2HC1AQ96GY0 325 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 SGK494Q96LW2 274 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 PARLQ9H300 379 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 TNFRSF18Q9Y5U5 241 aa4.46□□□□□ -1.7
SLIRP-203ENST00000554074 TRAV8-6A0A0B4J262 113 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 LOC100131303A0A0U1RQF7 123 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 EPM2AB3EWF7 344 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 B4DEV8 164 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 KRBOX1C9JBD0 128 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 SH2D1AO60880 128 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 MGST1P10620 155 aaKnown RBP4.45□□□□□ -1.7
SLIRP-203ENST00000554074 RNASE3P12724 160 aaKnown RBP4.45□□□□□ -1.7
SLIRP-203ENST00000554074 ASIPP42127 132 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 CRIP1P50238 77 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 TMEM241Q24JQ0 296 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 LELP1Q5T871 98 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 ZFP2Q6ZN57 461 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 FAM231DQ6ZW35 169 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 SLC25A29Q8N8R3 303 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 NHLRC2Q8NBF2 726 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 SMIM7Q9BQ49 75 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 DERL1Q9BUN8 251 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 IL36BQ9NZH7 164 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 C11orf21Q9P2W6 132 aa4.45□□□□□ -1.7
SLIRP-203ENST00000554074 TRBV20OR9-2A0A075B6H5 130 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 IGKV3D-20A0A0C4DH25 116 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 C19orf71A6NCJ1 209 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 PGPEP1LA6NFU8 196 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 A8MWV9 139 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 F2Z2F3 143 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 IGLV2-8P01709 118 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 P01737 135 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 OR5AL1P0C617 328 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 S100A4P26447 101 aaKnown RBP4.44□□□□□ -1.7
SLIRP-203ENST00000554074 XGP55808 180 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 LAGE3Q14657 143 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 CT83Q5H943 113 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 WDR73Q6P4I2 378 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 OCC1Q8TAD7 63 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 NTN5Q8WTR8 489 aaPredicted RBP4.44□□□□□ -1.7
SLIRP-203ENST00000554074 GTSF1LQ9H1H1 148 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 NAT8Q9UHE5 227 aa4.44□□□□□ -1.7
SLIRP-203ENST00000554074 FAM231BA6NCW3 169 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 A8MWL6 223 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 LINC00694P0DN24 101 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 GCSHP23434 173 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 PNRC1Q12796 327 aaPredicted RBP4.43□□□□□ -1.7
SLIRP-203ENST00000554074 OR10J3Q5JRS4 329 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 LINC01551Q86U37 167 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 SYT8Q8NBV8 401 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 ATP6V0E2Q8NHE4 81 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 TMEM70Q9BUB7 260 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 SSBP4Q9BWG4 385 aaPredicted RBP4.43□□□□□ -1.7
SLIRP-203ENST00000554074 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
SLIRP-203ENST00000554074 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
SLIRP-203ENST00000554074 RHODO00212 210 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 SNAI2O43623 268 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 PSCAO43653 123 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
SLIRP-203ENST00000554074 CEBPGP53567 150 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 CACNG7P62955 275 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 ZFP82Q8N141 532 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 NUDT10Q8NFP7 164 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 OR2D3Q8NGH3 330 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 FRZBQ92765 325 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 NUDT11Q96G61 164 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 TM2D2Q9BX73 214 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 GFRA4Q9GZZ7 299 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 RPP21Q9H633 154 aaKnown RBP4.42□□□□□ -1.7
SLIRP-203ENST00000554074 PHLDA3Q9Y5J5 127 aa4.42□□□□□ -1.7
SLIRP-203ENST00000554074 A0A087WWC5 75 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms